FFCP PHASE1:Hg19::chrX:100129320..100129329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27035 | |EntrezGene=27035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7889 | |HGNC=7889 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC60,Q5H9D4,Q9Y5S8 | |UniProt=E9PC60,Q5H9D4,Q9Y5S8 | ||
|association_with_transcript=4bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end | |association_with_transcript=4bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end | ||
|cluster_id=chrX:100129320..100129329,- | |||
|coexpression_cluster_id=C201 | |coexpression_cluster_id=C201 | ||
|description=CAGE_peak_3_at_NOX1_5end | |description=CAGE_peak_3_at_NOX1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!1.77e-28!19;CL:0000076!1.41e-09!62;CL:0000213!1.48e-08!57;CL:0000215!1.48e-08!57;CL:0002563!6.26e-08!4 | |ontology_enrichment_celltype=CL:0000077!1.77e-28!19;CL:0000076!1.41e-09!62;CL:0000213!1.48e-08!57;CL:0000215!1.48e-08!57;CL:0002563!6.26e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.16e-18;19!CL:0002097;1.61e-08;2!CL:0002253;2.40e-08;2 | |ontology_enrichment_celltype_v019=CL:0000077;1.16e-18;19!CL:0002097;1.61e-08;2!CL:0002253;2.40e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,9.46e-19,19;CL:0002097,1.61e-08,2;CL:0002253,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.98e-16;1!UBERON:0005754;2.21e-15;1!UBERON:0007297;2.40e-08;2 | |ontology_enrichment_development_v019=UBERON:0001045;9.98e-16;1!UBERON:0005754;2.21e-15;1!UBERON:0007297;2.40e-08;2 | ||
|ontology_enrichment_disease=DOID:3112!5.82e-08!1 | |ontology_enrichment_disease=DOID:3112!5.82e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.49e-23!11;UBERON:0001155!5.24e-20!9;UBERON:0000160!3.77e-15!27;UBERON:0005409!1.77e-14!35;UBERON:0004907!1.69e-13!5;UBERON:0006947!2.71e-10!3;UBERON:0004054!2.71e-10!3;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0001000!2.33e-08!1;UBERON:0005352!2.33e-08!1;UBERON:0000998!2.50e-08!1;UBERON:0006868!2.50e-08!1;UBERON:0000989!3.57e-08!1;UBERON:0008811!3.57e-08!1;UBERON:0006258!3.57e-08!1;UBERON:0005876!3.57e-08!1;UBERON:0004874!3.57e-08!1;UBERON:0001052!4.74e-08!4;UBERON:0001242!6.26e-08!4;UBERON:0005904!6.26e-08!4;UBERON:0001262!6.26e-08!4;UBERON:0004786!6.26e-08!4;UBERON:0004808!6.26e-08!4;UBERON:0001277!6.26e-08!4 | |ontology_enrichment_uberon=UBERON:0000059!3.49e-23!11;UBERON:0001155!5.24e-20!9;UBERON:0000160!3.77e-15!27;UBERON:0005409!1.77e-14!35;UBERON:0004907!1.69e-13!5;UBERON:0006947!2.71e-10!3;UBERON:0004054!2.71e-10!3;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0001000!2.33e-08!1;UBERON:0005352!2.33e-08!1;UBERON:0000998!2.50e-08!1;UBERON:0006868!2.50e-08!1;UBERON:0000989!3.57e-08!1;UBERON:0008811!3.57e-08!1;UBERON:0006258!3.57e-08!1;UBERON:0005876!3.57e-08!1;UBERON:0004874!3.57e-08!1;UBERON:0001052!4.74e-08!4;UBERON:0001242!6.26e-08!4;UBERON:0005904!6.26e-08!4;UBERON:0001262!6.26e-08!4;UBERON:0004786!6.26e-08!4;UBERON:0004808!6.26e-08!4;UBERON:0001277!6.26e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;2.29e-46;11!UBERON:0001155;8.77e-40;9!UBERON:0000160;2.59e-28;17!UBERON:0004907;5.09e-26;5!UBERON:0005409;3.95e-22;22!UBERON:0006947;1.15e-19;3!UBERON:0004054;1.15e-19;3!UBERON:0001154;9.98e-16;1!UBERON:0001153;9.98e-16;1!UBERON:0009854;9.98e-16;1!UBERON:0004921;2.00e-15;33!UBERON:0001000;2.21e-15;1!UBERON:0000998;2.21e-15;1!UBERON:0006868;2.21e-15;1!UBERON:0005352;2.21e-15;1!UBERON:0001052;5.24e-15;4!UBERON:0005904;5.24e-15;4 | |ontology_enrichment_uberon_v019=UBERON:0000059;2.29e-46;11!UBERON:0001155;8.77e-40;9!UBERON:0000160;2.59e-28;17!UBERON:0004907;5.09e-26;5!UBERON:0005409;3.95e-22;22!UBERON:0006947;1.15e-19;3!UBERON:0004054;1.15e-19;3!UBERON:0001154;9.98e-16;1!UBERON:0001153;9.98e-16;1!UBERON:0009854;9.98e-16;1!UBERON:0004921;2.00e-15;33!UBERON:0001000;2.21e-15;1!UBERON:0000998;2.21e-15;1!UBERON:0006868;2.21e-15;1!UBERON:0005352;2.21e-15;1!UBERON:0001052;5.24e-15;4!UBERON:0005904;5.24e-15;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.96e-46,11;UBERON:0001155,9.14e-40,9;UBERON:0000160,2.36e-28,17;UBERON:0004907,3.94e-26,5;UBERON:0005409,1.38e-19,25;UBERON:0006947,2.04e-19,3;UBERON:0004054,2.04e-19,3;UBERON:0001154,8.63e-16,1;UBERON:0001153,8.63e-16,1;UBERON:0001045,8.63e-16,1;UBERON:0001000,3.17e-15,1;UBERON:0005352,3.17e-15,1;UBERON:0000998,3.66e-15,1;UBERON:0006868,3.66e-15,1;UBERON:0001052,4.55e-15,4;UBERON:0005904,8.02e-15,4;UBERON:0001046,3.29e-12,19;UBERON:0004921,6.06e-07,118 | |||
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|short_description=p3@NOX1 | |short_description=p3@NOX1 | ||
}} | }} |
Latest revision as of 17:44, 18 September 2015
Short description: | p3@NOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NOX1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 4bp_to_ENST00000372957, ENST00000372961, ENST00000372966, NM_007052, NM_013955, uc004egj.2, uc004egl.3, uc010nne.2_5end |
EntrezGene: | NOX1 |
HGNC: | 7889 |
UniProt: | E9PC60Q5H9D4Q9Y5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 9.46e-19 | 19 |
cortical cell of adrenal gland | 1.61e-08 | 2 |
epithelial cell of large intestine | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.96e-46 | 11 |
colon | 9.14e-40 | 9 |
intestine | 2.36e-28 | 17 |
lower digestive tract | 3.94e-26 | 5 |
gastrointestinal system | 1.38e-19 | 25 |
male genital duct | 2.04e-19 | 3 |
internal male genitalia | 2.04e-19 | 3 |
vermiform appendix | 8.63e-16 | 1 |
caecum | 8.63e-16 | 1 |
midgut | 8.63e-16 | 1 |
vas deferens | 3.17e-15 | 1 |
spermatic cord | 3.17e-15 | 1 |
seminal vesicle | 3.66e-15 | 1 |
seminal fluid secreting gland | 3.66e-15 | 1 |
rectum | 4.55e-15 | 4 |
duct of male reproductive system | 8.02e-15 | 4 |
hindgut | 3.29e-12 | 19 |
subdivision of digestive tract | 6.06e-07 | 118 |