FFCP PHASE1:Hg19::chr10:3899794..3899803,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3899794..3899803,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr10:3899794..3899803,+ | |description=CAGE_peak_at_chr10:3899794..3899803,+ | ||
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|ontology_enrichment_celltype=CL:0002274!9.07e-27!5;CL:0000457!9.07e-27!5;CL:0002191!9.07e-27!5;CL:0000097!9.07e-27!5;CL:0000831!9.07e-27!5;CL:0002028!9.07e-27!5;CL:0000766!2.77e-21!76;CL:0000839!3.84e-19!70;CL:0000557!7.30e-19!71;CL:0002057!4.07e-16!42;CL:0000163!3.52e-15!9;CL:0000860!5.18e-15!45;CL:0000763!3.77e-14!112;CL:0000049!3.77e-14!112;CL:0000738!2.54e-13!140;CL:0000037!1.29e-10!172;CL:0000566!1.29e-10!172;CL:0002031!2.00e-10!124;CL:0002194!2.07e-10!63;CL:0000576!2.07e-10!63;CL:0000040!2.07e-10!63;CL:0000559!2.07e-10!63;CL:0002009!4.44e-10!65;CL:0000988!5.80e-10!182;CL:0002032!3.03e-09!165;CL:0000837!3.03e-09!165;CL:0002087!7.49e-07!119 | |ontology_enrichment_celltype=CL:0002274!9.07e-27!5;CL:0000457!9.07e-27!5;CL:0002191!9.07e-27!5;CL:0000097!9.07e-27!5;CL:0000831!9.07e-27!5;CL:0002028!9.07e-27!5;CL:0000766!2.77e-21!76;CL:0000839!3.84e-19!70;CL:0000557!7.30e-19!71;CL:0002057!4.07e-16!42;CL:0000163!3.52e-15!9;CL:0000860!5.18e-15!45;CL:0000763!3.77e-14!112;CL:0000049!3.77e-14!112;CL:0000738!2.54e-13!140;CL:0000037!1.29e-10!172;CL:0000566!1.29e-10!172;CL:0002031!2.00e-10!124;CL:0002194!2.07e-10!63;CL:0000576!2.07e-10!63;CL:0000040!2.07e-10!63;CL:0000559!2.07e-10!63;CL:0002009!4.44e-10!65;CL:0000988!5.80e-10!182;CL:0002032!3.03e-09!165;CL:0000837!3.03e-09!165;CL:0002087!7.49e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.76e-118;5!CL:0000163;3.75e-66;9!CL:0000151;1.59e-17;36 | |ontology_enrichment_celltype_v019=CL:0000097;7.76e-118;5!CL:0000163;3.75e-66;9!CL:0000151;1.59e-17;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.76e-118,5;CL:0002028,7.76e-118,5;CL:0000163,3.75e-66,9;CL:0000151,1.62e-17,36;CL:0000839,6.35e-10,66;CL:0000557,8.58e-10,67;CL:0000766,3.42e-09,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.17e-16!80;UBERON:0002390!1.22e-15!102;UBERON:0003061!1.22e-15!102;UBERON:0001474!1.93e-15!86;UBERON:0002193!3.72e-14!112;UBERON:0004765!5.10e-13!101;UBERON:0001434!5.10e-13!101;UBERON:0002405!2.55e-11!115;UBERON:0002204!3.96e-09!167;UBERON:0003081!9.04e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!1.17e-16!80;UBERON:0002390!1.22e-15!102;UBERON:0003061!1.22e-15!102;UBERON:0001474!1.93e-15!86;UBERON:0002193!3.72e-14!112;UBERON:0004765!5.10e-13!101;UBERON:0001434!5.10e-13!101;UBERON:0002405!2.55e-11!115;UBERON:0002204!3.96e-09!167;UBERON:0003081!9.04e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.08e-09,76;UBERON:0001474,3.31e-08,82;UBERON:0004765,1.43e-07,90;UBERON:0002405,2.32e-07,93;UBERON:0002390,4.88e-07,98;UBERON:0003061,4.88e-07,98;UBERON:0001434,6.45e-07,100 | |||
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|short_description=p@chr10:3899794..3899803,+ | |short_description=p@chr10:3899794..3899803,+ | ||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3899794..3899803, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3899794..3899803, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.76e-118 | 5 |
basophil mast progenitor cell | 7.76e-118 | 5 |
endocrine cell | 3.75e-66 | 9 |
secretory cell | 1.62e-17 | 36 |
myeloid lineage restricted progenitor cell | 6.35e-10 | 66 |
granulocyte monocyte progenitor cell | 8.58e-10 | 67 |
myeloid leukocyte | 3.42e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.08e-09 | 76 |
bone element | 3.31e-08 | 82 |
skeletal element | 1.43e-07 | 90 |
immune system | 2.32e-07 | 93 |
hematopoietic system | 4.88e-07 | 98 |
blood island | 4.88e-07 | 98 |
skeletal system | 6.45e-07 | 100 |