FFCP PHASE1:Hg19::chr16:53078198..53078211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:53078198..53078211,- | |||
|description=CAGE_peak_at_chr16:53078198..53078211,- | |description=CAGE_peak_at_chr16:53078198..53078211,- | ||
|id=chr16:53078198..53078211,- | |id=chr16:53078198..53078211,- | ||
|ontology_enrichment_celltype=CL:0002322!5.36e-07!5 | |ontology_enrichment_celltype=CL:0002322!5.36e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000313;6.92e-16;1!CL:0000511;1.78e-15;1!CL:0002625;1.78e-15;1!CL:0000216;1.78e-15;1!CL:0000083;4.23e-15;4!CL:0000159;1.34e-08;2 | |ontology_enrichment_celltype_v019=CL:0000313;6.92e-16;1!CL:0000511;1.78e-15;1!CL:0002625;1.78e-15;1!CL:0000216;1.78e-15;1!CL:0000083;4.23e-15;4!CL:0000159;1.34e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,7.46e-16,1;CL:0000511,1.34e-15,1;CL:0002625,1.34e-15,1;CL:0000216,1.34e-15,1;CL:0000083,3.18e-15,4;CL:0000159,1.39e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.86e-13;10!UBERON:0007687;1.86e-13;10 | |ontology_enrichment_development_v019=UBERON:0003918;1.86e-13;10!UBERON:0007687;1.86e-13;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;6.92e-16;1!DOID:1793;4.23e-15;4!DOID:170;2.19e-10;6!DOID:299;2.14e-09;25!DOID:4074;2.15e-08;2!DOID:4905;2.15e-08;2!DOID:4929;2.15e-08;2!DOID:3498;2.15e-08;2 | |ontology_enrichment_disease_v019=DOID:2152;6.92e-16;1!DOID:1793;4.23e-15;4!DOID:170;2.19e-10;6!DOID:299;2.14e-09;25!DOID:4074;2.15e-08;2!DOID:4905;2.15e-08;2!DOID:4929;2.15e-08;2!DOID:3498;2.15e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,7.46e-16,1;DOID:1793,3.18e-15,4;DOID:170,1.81e-10,6;DOID:299,2.21e-09,25;DOID:4074,1.50e-08,2;DOID:4905,1.50e-08,2;DOID:3498,1.50e-08,2;DOID:4929,2.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.79e-12!115;UBERON:0005904!1.47e-09!4;UBERON:0006947!2.39e-07!3;UBERON:0004054!2.39e-07!3;UBERON:0001896!7.97e-07!3;UBERON:0005290!7.97e-07!3;UBERON:0010096!7.97e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.79e-12!115;UBERON:0005904!1.47e-09!4;UBERON:0006947!2.39e-07!3;UBERON:0004054!2.39e-07!3;UBERON:0001896!7.97e-07!3;UBERON:0005290!7.97e-07!3;UBERON:0010096!7.97e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004909;1.54e-29;2!UBERON:0004911;6.92e-16;1!UBERON:0000996;1.78e-15;1!UBERON:0001136;1.78e-15;1!UBERON:0001343;1.78e-15;1!UBERON:0004910;1.78e-15;1!UBERON:0004813;1.78e-15;1!UBERON:0001264;1.75e-13;10!UBERON:0002323;1.83e-10;45!UBERON:0002553;7.32e-09;52!UBERON:0003127;2.15e-08;2!UBERON:0004458;2.29e-08;48!UBERON:0002075;9.66e-08;18 | |ontology_enrichment_uberon_v019=UBERON:0004909;1.54e-29;2!UBERON:0004911;6.92e-16;1!UBERON:0000996;1.78e-15;1!UBERON:0001136;1.78e-15;1!UBERON:0001343;1.78e-15;1!UBERON:0004910;1.78e-15;1!UBERON:0004813;1.78e-15;1!UBERON:0001264;1.75e-13;10!UBERON:0002323;1.83e-10;45!UBERON:0002553;7.32e-09;52!UBERON:0003127;2.15e-08;2!UBERON:0004458;2.29e-08;48!UBERON:0002075;9.66e-08;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,1.24e-29,2;UBERON:0004911,7.46e-16,1;UBERON:0001136,1.34e-15,1;UBERON:0001343,1.34e-15,1;UBERON:0004910,1.34e-15,1;UBERON:0005154,1.34e-15,1;UBERON:0005295,1.34e-15,1;UBERON:0004813,1.34e-15,1;UBERON:0005297,1.34e-15,1;UBERON:0005294,1.34e-15,1;UBERON:0010141,1.34e-15,1;UBERON:0005891,1.34e-15,1;UBERON:0000996,1.78e-15,1;UBERON:0001264,1.47e-13,10;UBERON:0002323,6.50e-11,46;UBERON:0004458,3.15e-10,49;UBERON:0003886,2.97e-09,54;UBERON:0003127,2.48e-08,2;UBERON:0005177,2.54e-08,101;UBERON:0002553,3.72e-08,61;UBERON:0002075,8.81e-08,18;UBERON:0003133,2.40e-07,48 | |||
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| ||
|short_description=p@chr16:53078198..53078211,- | |short_description=p@chr16:53078198..53078211,- | ||
}} | }} |
Latest revision as of 09:44, 25 July 2015
Short description: | p@chr16:53078198..53078211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:53078198..53078211, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 7.46e-16 | 1 |
androgen binding protein secreting cell | 1.34e-15 | 1 |
seminiferous tubule epithelial cell | 1.34e-15 | 1 |
Sertoli cell | 1.34e-15 | 1 |
epithelial cell of pancreas | 3.18e-15 | 4 |
seromucus secreting cell | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 1.24e-29 | 2 |
epithelium of female gonad | 7.46e-16 | 1 |
mesothelium | 1.34e-15 | 1 |
seminiferous tubule of testis | 1.34e-15 | 1 |
epithelium of male gonad | 1.34e-15 | 1 |
epithelial cord | 1.34e-15 | 1 |
sex cord | 1.34e-15 | 1 |
seminiferous tubule epithelium | 1.34e-15 | 1 |
testis sex cord | 1.34e-15 | 1 |
genital ridge | 1.34e-15 | 1 |
primitive sex cord of indifferent gonad | 1.34e-15 | 1 |
coelomic epithelium | 1.34e-15 | 1 |
vagina | 1.78e-15 | 1 |
pancreas | 1.47e-13 | 10 |
body cavity | 6.50e-11 | 46 |
body cavity or lining | 3.15e-10 | 49 |
body cavity precursor | 2.97e-09 | 54 |
open tracheal system trachea | 2.48e-08 | 2 |
trunk region element | 2.54e-08 | 101 |
anatomical cavity | 3.72e-08 | 61 |
viscus | 8.81e-08 | 18 |
reproductive organ | 2.40e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.46e-16 | 1 |
pancreatic cancer | 3.18e-15 | 4 |
endocrine gland cancer | 1.81e-10 | 6 |
adenocarcinoma | 2.21e-09 | 25 |
pancreas adenocarcinoma | 1.50e-08 | 2 |
pancreatic carcinoma | 1.50e-08 | 2 |
pancreatic ductal adenocarcinoma | 1.50e-08 | 2 |
tubular adenocarcinoma | 2.31e-08 | 2 |