FFCP PHASE1:Hg19::chr22:19754040..19754050,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:19754040..19754050,+ | |||
|description=CAGE_peak_at_chr22:19754040..19754050,+ | |description=CAGE_peak_at_chr22:19754040..19754050,+ | ||
|id=chr22:19754040..19754050,+ | |id=chr22:19754040..19754050,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.28e-07!35 | |ontology_enrichment_celltype=CL:0000115!3.28e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.54e-22;24!CL:0000115;3.10e-17;36!CL:0002138;2.02e-13;6!CL:0002078;4.62e-13;45!CL:0002144;4.88e-13;3!CL:0000071;3.89e-12;18!CL:0000213;4.17e-08;58!CL:0000215;4.17e-08;58!CL:0002188;8.91e-08;5!CL:0000097;8.91e-08;5 | |ontology_enrichment_celltype_v019=CL:0002139;3.54e-22;24!CL:0000115;3.10e-17;36!CL:0002138;2.02e-13;6!CL:0002078;4.62e-13;45!CL:0002144;4.88e-13;3!CL:0000071;3.89e-12;18!CL:0000213;4.17e-08;58!CL:0000215;4.17e-08;58!CL:0002188;8.91e-08;5!CL:0000097;8.91e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.19e-22,36;CL:0002139,3.03e-22,24;CL:0002078,8.03e-18,45;CL:0000213,1.73e-13,58;CL:0000215,1.73e-13,58;CL:0005020,2.56e-13,6;CL:0002138,2.56e-13,6;CL:0005022,2.56e-13,6;CL:0002144,5.85e-13,3;CL:0000071,3.01e-12,18;CL:0002546,3.01e-12,18;CL:0002188,6.77e-08,5;CL:0000097,1.13e-07,5;CL:0002028,1.13e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;2.02e-13;6!CL:0002546;3.89e-12;18 | |ontology_enrichment_development_v019=CL:0005022;2.02e-13;6!CL:0002546;3.89e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.87e-10!53;UBERON:0001737!2.26e-10!9;UBERON:0001004!4.49e-09!72;UBERON:0008947!5.73e-09!38;UBERON:0003258!5.73e-09!38;UBERON:0000072!1.23e-08!46;UBERON:0001557!5.54e-08!19 | |ontology_enrichment_uberon=UBERON:0000065!1.87e-10!53;UBERON:0001737!2.26e-10!9;UBERON:0001004!4.49e-09!72;UBERON:0008947!5.73e-09!38;UBERON:0003258!5.73e-09!38;UBERON:0000072!1.23e-08!46;UBERON:0001557!5.54e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;4.88e-13;3!UBERON:0001915;4.88e-13;3!UBERON:0001982;4.88e-13;3!UBERON:0001723;5.18e-13;3!UBERON:0001033;5.18e-13;3!UBERON:0004638;3.89e-12;18!UBERON:0001986;3.89e-12;18!UBERON:0004852;3.89e-12;18!UBERON:0002426;2.59e-10;1!UBERON:0003831;2.59e-10;1!UBERON:0003898;2.59e-10;1!UBERON:0004830;2.59e-10;1!UBERON:0003830;2.59e-10;1!UBERON:0005175;2.59e-10;1!UBERON:0001774;2.59e-10;1!UBERON:0001103;2.59e-10;1!UBERON:0001473;3.33e-10;8!UBERON:0004536;3.33e-10;8!UBERON:0006558;3.33e-10;8!UBERON:0000487;6.69e-10;22!UBERON:0006914;1.08e-08;25!UBERON:0002465;2.90e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0010523;4.88e-13;3!UBERON:0001915;4.88e-13;3!UBERON:0001982;4.88e-13;3!UBERON:0001723;5.18e-13;3!UBERON:0001033;5.18e-13;3!UBERON:0004638;3.89e-12;18!UBERON:0001986;3.89e-12;18!UBERON:0004852;3.89e-12;18!UBERON:0002426;2.59e-10;1!UBERON:0003831;2.59e-10;1!UBERON:0003898;2.59e-10;1!UBERON:0004830;2.59e-10;1!UBERON:0003830;2.59e-10;1!UBERON:0005175;2.59e-10;1!UBERON:0001774;2.59e-10;1!UBERON:0001103;2.59e-10;1!UBERON:0001473;3.33e-10;8!UBERON:0004536;3.33e-10;8!UBERON:0006558;3.33e-10;8!UBERON:0000487;6.69e-10;22!UBERON:0006914;1.08e-08;25!UBERON:0002465;2.90e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.89e-13,3;UBERON:0001033,4.89e-13,3;UBERON:0010056,4.89e-13,3;UBERON:0010523,5.85e-13,3;UBERON:0001915,5.85e-13,3;UBERON:0001982,5.85e-13,3;UBERON:0004638,3.01e-12,18;UBERON:0001986,3.01e-12,18;UBERON:0004852,3.01e-12,18;UBERON:0002426,2.16e-10,1;UBERON:0003831,2.16e-10,1;UBERON:0003898,2.16e-10,1;UBERON:0004830,2.16e-10,1;UBERON:0003830,2.16e-10,1;UBERON:0005175,2.16e-10,1;UBERON:0001774,2.16e-10,1;UBERON:0001103,2.16e-10,1;UBERON:0010084,2.16e-10,1;UBERON:0001473,3.97e-10,8;UBERON:0004536,3.97e-10,8;UBERON:0006558,3.97e-10,8;UBERON:0000487,5.43e-10,22;UBERON:0006914,9.03e-09,25;UBERON:0002465,3.33e-08,10;UBERON:0001557,1.33e-07,19;UBERON:0000055,3.40e-07,68 | |||
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|short_description=p@chr22:19754040..19754050,+ | |short_description=p@chr22:19754040..19754050,+ | ||
}} | }} |
Latest revision as of 19:09, 28 July 2015
Short description: | p@chr22:19754040..19754050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:19754040..19754050, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.19e-22 | 36 |
endothelial cell of vascular tree | 3.03e-22 | 24 |
meso-epithelial cell | 8.03e-18 | 45 |
lining cell | 1.73e-13 | 58 |
barrier cell | 1.73e-13 | 58 |
lymphangioblast | 2.56e-13 | 6 |
endothelial cell of lymphatic vessel | 2.56e-13 | 6 |
vascular lymphangioblast | 2.56e-13 | 6 |
capillary endothelial cell | 5.85e-13 | 3 |
blood vessel endothelial cell | 3.01e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-12 | 18 |
glomerular endothelial cell | 6.77e-08 | 5 |
mast cell | 1.13e-07 | 5 |
basophil mast progenitor cell | 1.13e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.89e-13 | 3 |
gustatory system | 4.89e-13 | 3 |
future tongue | 4.89e-13 | 3 |
microcirculatory vessel | 5.85e-13 | 3 |
endothelium of capillary | 5.85e-13 | 3 |
capillary | 5.85e-13 | 3 |
blood vessel endothelium | 3.01e-12 | 18 |
endothelium | 3.01e-12 | 18 |
cardiovascular system endothelium | 3.01e-12 | 18 |
chest muscle | 2.16e-10 | 1 |
respiratory system muscle | 2.16e-10 | 1 |
skeletal muscle of trunk | 2.16e-10 | 1 |
respiratory system skeletal muscle | 2.16e-10 | 1 |
thoracic segment muscle | 2.16e-10 | 1 |
chest organ | 2.16e-10 | 1 |
muscle of trunk | 2.16e-10 | 1 |
diaphragm | 2.16e-10 | 1 |
future diaphragm | 2.16e-10 | 1 |
lymphatic vessel | 3.97e-10 | 8 |
lymph vasculature | 3.97e-10 | 8 |
lymphatic part of lymphoid system | 3.97e-10 | 8 |
simple squamous epithelium | 5.43e-10 | 22 |
squamous epithelium | 9.03e-09 | 25 |
lymphoid system | 3.33e-08 | 10 |
upper respiratory tract | 1.33e-07 | 19 |
vessel | 3.40e-07 | 68 |