FFCP PHASE1:Hg19::chr9:12701203..12701216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-428bp_to_ENST00000470909_5end | |association_with_transcript=-428bp_to_ENST00000470909_5end | ||
|cluster_id=chr9:12701203..12701216,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_18_at_TYRP1_5end | |description=CAGE_peak_18_at_TYRP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!2.72e-43!10;CL:0000541!2.72e-43!10;CL:0000147!9.56e-31!14;CL:0002567!1.34e-27!3;CL:0000710!2.56e-21!20;CL:0002195!1.43e-18!2;CL:0002571!1.43e-18!2;CL:0000075!1.33e-15!27;CL:0002077!1.25e-12!33;CL:0000333!3.07e-12!41;CL:0000325!1.45e-10!39;CL:0002566!1.98e-10!1;CL:0002568!5.79e-10!1;CL:0000133!2.57e-08!59;CL:0000221!8.91e-07!71 | |ontology_enrichment_celltype=CL:0000148!2.72e-43!10;CL:0000541!2.72e-43!10;CL:0000147!9.56e-31!14;CL:0002567!1.34e-27!3;CL:0000710!2.56e-21!20;CL:0002195!1.43e-18!2;CL:0002571!1.43e-18!2;CL:0000075!1.33e-15!27;CL:0002077!1.25e-12!33;CL:0000333!3.07e-12!41;CL:0000325!1.45e-10!39;CL:0002566!1.98e-10!1;CL:0002568!5.79e-10!1;CL:0000133!2.57e-08!59;CL:0000221!8.91e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.57e-81;10!CL:0000147;8.78e-58;14!CL:0002567;1.89e-50;3!CL:0000710;2.04e-40;20!CL:0002195;1.93e-33;2!CL:0002571;1.93e-33;2!CL:0000075;6.83e-30;27!CL:0002077;6.26e-21;34!CL:0002566;3.75e-18;1 | |ontology_enrichment_celltype_v019=CL:0000148;6.57e-81;10!CL:0000147;8.78e-58;14!CL:0002567;1.89e-50;3!CL:0000710;2.04e-40;20!CL:0002195;1.93e-33;2!CL:0002571;1.93e-33;2!CL:0000075;6.83e-30;27!CL:0002077;6.26e-21;34!CL:0002566;3.75e-18;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.58e-81,10;CL:0000541,6.58e-81,10;CL:0000147,8.79e-58,14;CL:0002567,1.89e-50,3;CL:0000710,2.04e-40,20;CL:0002195,1.93e-33,2;CL:0002571,1.93e-33,2;CL:0000075,6.83e-30,27;CL:0002077,1.09e-23,34;CL:0000333,1.13e-18,41;CL:0002566,3.75e-18,1;CL:0000133,4.63e-13,59;CL:0000221,1.07e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;2.34e-07;59 | |ontology_enrichment_development_v019=CL:0000133;2.34e-07;59 | ||
|ontology_enrichment_disease=DOID:1909!1.31e-18!2;DOID:3371!4.06e-10!1;DOID:4549!4.06e-10!1;DOID:5861!4.06e-10!1;DOID:6496!4.06e-10!1 | |ontology_enrichment_disease=DOID:1909!1.31e-18!2;DOID:3371!4.06e-10!1;DOID:4549!4.06e-10!1;DOID:5861!4.06e-10!1;DOID:6496!4.06e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.93e-33;2!DOID:3371;1.22e-17;1!DOID:4549;1.22e-17;1!DOID:5861;1.22e-17;1!DOID:6496;1.22e-17;1 | |ontology_enrichment_disease_v019=DOID:1909;1.93e-33;2!DOID:3371;1.22e-17;1!DOID:4549;1.22e-17;1!DOID:5861;1.22e-17;1!DOID:6496;1.22e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.64e-33,2;DOID:3371,1.44e-17,1;DOID:4549,1.44e-17,1;DOID:5861,1.44e-17,1;DOID:6496,1.44e-17,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.64e-07;3!UBERON:0004755;9.64e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002418;9.64e-07;3!UBERON:0004755;9.64e-07;3 | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p18@TYRP1 | |short_description=p18@TYRP1 | ||
}} | }} |
Latest revision as of 23:52, 24 September 2015
Short description: | p18@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -428bp_to_ENST00000470909_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.58e-81 | 10 |
melanoblast | 6.58e-81 | 10 |
pigment cell | 8.79e-58 | 14 |
light melanocyte | 1.89e-50 | 3 |
neurecto-epithelial cell | 2.04e-40 | 20 |
hepatic stem cell | 1.93e-33 | 2 |
hepatic mesenchymal stem cell | 1.93e-33 | 2 |
columnar/cuboidal epithelial cell | 6.83e-30 | 27 |
ecto-epithelial cell | 1.09e-23 | 34 |
migratory neural crest cell | 1.13e-18 | 41 |
dark melanocyte | 3.75e-18 | 1 |
neurectodermal cell | 4.63e-13 | 59 |
ectodermal cell | 1.07e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.64e-33 | 2 |
chondrosarcoma | 1.44e-17 | 1 |
extraosseous chondrosarcoma | 1.44e-17 | 1 |
myxoid chondrosarcoma | 1.44e-17 | 1 |
extraskeletal myxoid chondrosarcoma | 1.44e-17 | 1 |