FFCP PHASE1:Hg19::chr21:17791895..17791904,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:17791895..17791904,+
|short_description=p26@LINC00478
|description=CAGE_peak_26_at_LINC00478_5end
|association_with_transcript=57bp_to_ENST00000453910_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_ENST00000453910_5end | |||
|cluster_id=chr21:17791895..17791904,+ | |||
|description=CAGE_peak_26_at_LINC00478_5end | |||
|id=chr21:17791895..17791904,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002600;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,6.58e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.40e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-17!115;UBERON:0001017!1.55e-11!82;UBERON:0005743!2.91e-11!86;UBERON:0000073!2.43e-10!94;UBERON:0001016!2.43e-10!94;UBERON:0000477!3.26e-10!286;UBERON:0000955!5.67e-10!69;UBERON:0006238!5.67e-10!69;UBERON:0002616!8.13e-10!59;UBERON:0002346!1.14e-09!90;UBERON:0000468!2.29e-09!659;UBERON:0000153!3.82e-09!129;UBERON:0007811!3.82e-09!129;UBERON:0001049!5.25e-09!57;UBERON:0005068!5.25e-09!57;UBERON:0006241!5.25e-09!57;UBERON:0007135!5.25e-09!57;UBERON:0003075!1.23e-08!86;UBERON:0007284!1.23e-08!86;UBERON:0002050!2.81e-08!605;UBERON:0005423!2.81e-08!605;UBERON:0000922!3.01e-08!612;UBERON:0000924!4.68e-08!173;UBERON:0006601!4.68e-08!173;UBERON:0000033!7.00e-08!123;UBERON:0000923!7.52e-08!604;UBERON:0005291!7.52e-08!604;UBERON:0006598!7.52e-08!604;UBERON:0002532!7.52e-08!604;UBERON:0000062!1.61e-07!511;UBERON:0004111!1.66e-07!241;UBERON:0004121!2.97e-07!169;UBERON:0000483!6.25e-07!309;UBERON:0000467!9.75e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.40e-14;1!UBERON:0006834;1.40e-14;1!UBERON:0000989;1.40e-14;1!UBERON:0002135;1.40e-14;1!UBERON:0008811;1.40e-14;1!UBERON:0003126;1.65e-08;7!UBERON:0001005;1.65e-08;7!UBERON:0003127;6.14e-08;2!UBERON:0000341;6.14e-08;2!UBERON:0001876;6.14e-08;2!UBERON:0002133;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.07e-14,1;UBERON:0008811,1.07e-14,1;UBERON:0006258,1.07e-14,1;UBERON:0005876,1.07e-14,1;UBERON:0004874,1.07e-14,1;UBERON:0002135,1.23e-14,1;UBERON:0006834,1.41e-14,1;UBERON:0003126,1.37e-08,7;UBERON:0001005,1.37e-08,7;UBERON:0003127,4.09e-08,2;UBERON:0001876,4.38e-08,2;UBERON:0002133,5.74e-08,2;UBERON:0000341,7.03e-08,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0.85870796139317,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0.32681539055697,0,1.07730361905316,0,0,0,0,0,0.274792780205587,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.189559738885464,0,0.518440956986236,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0.288950589901519,0.600420288709789,0,0,0,0,1.39641200636127,0.458320848023367,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,2.49027542885215,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0.126831620387814,1.09394961803644,0,1.48863353516788,0.175871244359621,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.285906176706625,0,0.348724276104376,0,0,0,1.0243108625637,0.691259661814092,0.860454717640555,0,0,0,0.68732060563215,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0.594092800654172,1.6906229103336,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0.872701380680755,0,0,0,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0.378893491091197,0,0,0,0.852935927603924,1.1903221573187,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0.684466602170562,0.202056159043763,0.358611026963382,1.99596213927608,0,0.106727345877715,0,0,0,1.34465588601153,1.62758471326295,0.665756774185513,0.805095174364105,0 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|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0.85870796139317,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0.32681539055697,0,1.07730361905316,0,0,0,0,0,0.274792780205587,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.189559738885464,0,0.518440956986236,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0.288950589901519,0.600420288709789,0,0,0,0,1.39641200636127,0.458320848023367,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,2.49027542885215,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0.126831620387814,1.09394961803644,0,1.48863353516788,0.175871244359621,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.285906176706625,0,0.348724276104376,0,0,0,1.0243108625637,0.691259661814092,0.860454717640555,0,0,0,0.68732060563215,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0.594092800654172,1.6906229103336,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0.872701380680755,0,0,0,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0.378893491091197,0,0,0,0.852935927603924,1.1903221573187,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0.684466602170562,0.202056159043763,0.358611026963382,1.99596213927608,0,0.106727345877715,0,0,0,1.34465588601153,1.62758471326295,0.665756774185513,0.805095174364105,0 | ||
|short_description=p26@LINC00478 | |||
}} | }} |
Latest revision as of 19:48, 17 September 2015
Short description: | p26@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_LINC00478_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000453910_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 1.07e-14 | 1 |
intromittent organ | 1.07e-14 | 1 |
lateral plate mesenchyme | 1.07e-14 | 1 |
undifferentiated genital tubercle | 1.07e-14 | 1 |
somatopleure | 1.07e-14 | 1 |
mitral valve | 1.23e-14 | 1 |
uterus or analog | 1.41e-14 | 1 |
trachea | 1.37e-08 | 7 |
respiratory airway | 1.37e-08 | 7 |
open tracheal system trachea | 4.09e-08 | 2 |
amygdala | 4.38e-08 | 2 |
atrioventricular valve | 5.74e-08 | 2 |
throat | 7.03e-08 | 2 |