FFCP PHASE1:Hg19::chr22:20004298..20004312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=421 | |EntrezGene=421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=728 | |HGNC=728 | ||
|TSSclassifier=strong | |||
|UniProt=O00192 | |UniProt=O00192 | ||
|association_with_transcript=0bp_to_NM_001670,uc002zqz.2_5end | |association_with_transcript=0bp_to_NM_001670,uc002zqz.2_5end | ||
|cluster_id=chr22:20004298..20004312,- | |||
|description=CAGE_peak_5_at_ARVCF_5end | |description=CAGE_peak_5_at_ARVCF_5end | ||
|id=chr22:20004298..20004312,- | |id=chr22:20004298..20004312,- | ||
|ontology_enrichment_celltype=CL:0002139!3.23e-08!24;CL:0002078!2.39e-07!44;CL:0000115!2.60e-07!35;CL:0000071!7.24e-07!18;CL:0002546!7.24e-07!18 | |ontology_enrichment_celltype=CL:0002139!3.23e-08!24;CL:0002078!2.39e-07!44;CL:0000115!2.60e-07!35;CL:0000071!7.24e-07!18;CL:0002546!7.24e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000313;6.05e-13;1!CL:0000764;4.17e-07;2!CL:0000159;4.17e-07;2!CL:0000558;4.17e-07;2 | |ontology_enrichment_celltype_v019=CL:0000313;6.05e-13;1!CL:0000764;4.17e-07;2!CL:0000159;4.17e-07;2!CL:0000558;4.17e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.77e-13,1;CL:0000159,3.70e-07,2;CL:0000764,3.93e-07,2;CL:0000765,3.93e-07,2;CL:0000050,3.93e-07,2;CL:0000038,3.93e-07,2;CL:0000558,3.93e-07,2;CL:0000547,3.93e-07,2;CL:0000549,3.93e-07,2;CL:0000550,3.93e-07,2;CL:0000552,3.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.80e-36;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.80e-36;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;6.05e-13;1 | |ontology_enrichment_disease_v019=DOID:2152;6.05e-13;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,4.77e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-13!82;UBERON:0005743!4.64e-12!86;UBERON:0000955!4.76e-12!69;UBERON:0006238!4.76e-12!69;UBERON:0001049!3.18e-11!57;UBERON:0005068!3.18e-11!57;UBERON:0006241!3.18e-11!57;UBERON:0007135!3.18e-11!57;UBERON:0000073!3.35e-11!94;UBERON:0001016!3.35e-11!94;UBERON:0002616!3.45e-11!59;UBERON:0007023!5.26e-10!115;UBERON:0002346!1.89e-08!90;UBERON:0003075!2.07e-08!86;UBERON:0007284!2.07e-08!86;UBERON:0002780!3.30e-08!41;UBERON:0001890!3.30e-08!41;UBERON:0006240!3.30e-08!41;UBERON:0000025!4.05e-08!194;UBERON:0003080!7.75e-08!42;UBERON:0006914!1.80e-07!25;UBERON:0000477!2.55e-07!286;UBERON:0004111!2.57e-07!241;UBERON:0001893!4.95e-07!34;UBERON:0001986!7.24e-07!18;UBERON:0004638!7.24e-07!18;UBERON:0004852!7.24e-07!18;UBERON:0000487!8.58e-07!22 | |ontology_enrichment_uberon=UBERON:0001017!2.26e-13!82;UBERON:0005743!4.64e-12!86;UBERON:0000955!4.76e-12!69;UBERON:0006238!4.76e-12!69;UBERON:0001049!3.18e-11!57;UBERON:0005068!3.18e-11!57;UBERON:0006241!3.18e-11!57;UBERON:0007135!3.18e-11!57;UBERON:0000073!3.35e-11!94;UBERON:0001016!3.35e-11!94;UBERON:0002616!3.45e-11!59;UBERON:0007023!5.26e-10!115;UBERON:0002346!1.89e-08!90;UBERON:0003075!2.07e-08!86;UBERON:0007284!2.07e-08!86;UBERON:0002780!3.30e-08!41;UBERON:0001890!3.30e-08!41;UBERON:0006240!3.30e-08!41;UBERON:0000025!4.05e-08!194;UBERON:0003080!7.75e-08!42;UBERON:0006914!1.80e-07!25;UBERON:0000477!2.55e-07!286;UBERON:0004111!2.57e-07!241;UBERON:0001893!4.95e-07!34;UBERON:0001986!7.24e-07!18;UBERON:0004638!7.24e-07!18;UBERON:0004852!7.24e-07!18;UBERON:0000487!8.58e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.68e-18;6!UBERON:0004911;6.05e-13;1!UBERON:0002680;1.54e-12;9!UBERON:0001895;1.54e-12;9!UBERON:0004733;1.53e-09;12!UBERON:0002028;1.53e-09;12!UBERON:0004732;7.56e-09;13!UBERON:0001905;4.17e-07;2!UBERON:0002757;4.17e-07;2!UBERON:0010134;4.17e-07;2!UBERON:0004909;4.17e-07;2!UBERON:0005408;4.17e-07;2!UBERON:0001899;4.17e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.68e-18;6!UBERON:0004911;6.05e-13;1!UBERON:0002680;1.54e-12;9!UBERON:0001895;1.54e-12;9!UBERON:0004733;1.53e-09;12!UBERON:0002028;1.53e-09;12!UBERON:0004732;7.56e-09;13!UBERON:0001905;4.17e-07;2!UBERON:0002757;4.17e-07;2!UBERON:0010134;4.17e-07;2!UBERON:0004909;4.17e-07;2!UBERON:0005408;4.17e-07;2!UBERON:0001899;4.17e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.37e-18,6;UBERON:0006215,1.37e-18,6;UBERON:0004911,4.77e-13,1;UBERON:0003076,6.02e-13,15;UBERON:0003057,6.02e-13,15;UBERON:0002680,1.34e-12,9;UBERON:0001895,1.34e-12,9;UBERON:0010092,1.34e-12,9;UBERON:0004733,1.38e-09,12;UBERON:0002028,1.38e-09,12;UBERON:0007277,1.38e-09,12;UBERON:0004732,6.89e-09,13;UBERON:0004909,3.70e-07,2;UBERON:0001905,5.60e-07,2;UBERON:0002757,5.60e-07,2;UBERON:0010134,5.60e-07,2;UBERON:0005408,5.60e-07,2;UBERON:0001899,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,0.732186172644509,0.735326160691737,0.81014194788176,0,0,0.112611480483322,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0.877039506583738,1.3071772551245,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,1.08006287447623,0.79312517629427,0.427296284509893,0.962479855263359,0,0,0.577076851905779,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,2.46174797895425,0,0,0,0.18714054040822,0,0.242721043499027,0.222886768554957,0.284136146806413,0,0,0,0,0.562677665642051,0.222617410045812,0.16480387422676,0.844501632511974,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0.524759999977174,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.291604613383254,0.694499979733169,0.885741385813839,0,1.52581736317083,3.64911557773041,4.43321428430321,0.219385397153973,0.21787692703798,0,0,0,0.46112780877612,0.359030577639089,0.217294743844016,0.638002319463839,0,0,0,0,0.332423363800313,0.676786981851542,0.980312671588698,0.503464760927528,0.569261198172555,0,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,0,0,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.416024019039416,0.867798691675654,0,0.174118413160805,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0.343609788497747,0.343189995723929,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,2.32991899054908,0.630265458457789,0.824158583811665,0.808842526250219,0,0.0846733320657845,0.795229689809303,0.272406812223151,0.643012593860077,0.275078873194468,0,0,0,0.182248669974074,0,0,0.104909176269996,0,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0.542999601753713,0,0,0,0,0,0,0.439656701034247,2.65013777824443,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.628216385000937,0,0.366078794705889,0.751145584238999,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0.691292180758654,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,1.07824811396682,0,0.982886743728125,0.169732529954025,0,0.123935764259002,0,0,0.315446980005013,0,0.705351887381368,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.276629009856872,0.161475645631851,0,0.294443155503077,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0.781514011233092,0,0,0,0.337687923091973,0,0,0.126831620387814,0,0,0,0,0.511049710558381,0,1.00885116665647,0,0.682986574053893,0,0,0,0.203909198930495,0.131545547125698,0.354581522651905,0.222462803784138,0,0.314231179832004,0.280272163313789,0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| ||
|short_description=p5@ARVCF | |short_description=p5@ARVCF | ||
}} | }} |
Latest revision as of 04:14, 19 September 2015
Short description: | p5@ARVCF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARVCF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001670, uc002zqz.2_5end |
EntrezGene: | ARVCF |
HGNC: | 728 |
UniProt: | O00192 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.77e-13 | 1 |
seromucus secreting cell | 3.70e-07 | 2 |
erythroid lineage cell | 3.93e-07 | 2 |
erythroblast | 3.93e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.93e-07 | 2 |
erythroid progenitor cell | 3.93e-07 | 2 |
reticulocyte | 3.93e-07 | 2 |
proerythroblast | 3.93e-07 | 2 |
basophilic erythroblast | 3.93e-07 | 2 |
polychromatophilic erythroblast | 3.93e-07 | 2 |
orthochromatic erythroblast | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.37e-18 | 6 |
rhombic lip | 1.37e-18 | 6 |
epithelium of female gonad | 4.77e-13 | 1 |
posterior neural tube | 6.02e-13 | 15 |
chordal neural plate | 6.02e-13 | 15 |
regional part of metencephalon | 1.34e-12 | 9 |
metencephalon | 1.34e-12 | 9 |
future metencephalon | 1.34e-12 | 9 |
segmental subdivision of hindbrain | 1.38e-09 | 12 |
hindbrain | 1.38e-09 | 12 |
presumptive hindbrain | 1.38e-09 | 12 |
segmental subdivision of nervous system | 6.89e-09 | 13 |
epithelium of gonad | 3.70e-07 | 2 |
pineal body | 5.60e-07 | 2 |
regional part of epithalamus | 5.60e-07 | 2 |
secretory circumventricular organ | 5.60e-07 | 2 |
circumventricular organ | 5.60e-07 | 2 |
epithalamus | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.77e-13 | 1 |