FFCP PHASE1:Hg19::chr7:94045713..94045725,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:94045713..94045725,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr7:94045713..94045725,+ | |description=CAGE_peak_at_chr7:94045713..94045725,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.12e-42!180;CL:0000057!9.45e-27!75;CL:0000680!3.92e-18!57;CL:0000056!3.92e-18!57;CL:0000355!3.92e-18!57;CL:0000187!4.45e-18!54;CL:0000183!1.56e-17!59;CL:0000192!1.05e-16!42;CL:0000514!1.05e-16!42;CL:0000393!3.76e-16!60;CL:0000211!3.76e-16!60;CL:0000048!5.02e-15!430;CL:0000723!4.06e-14!436;CL:0000034!2.59e-13!444;CL:0000359!5.75e-13!32;CL:0002620!5.90e-12!23;CL:0002334!7.05e-09!12;CL:0002371!2.31e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.12e-42!180;CL:0000057!9.45e-27!75;CL:0000680!3.92e-18!57;CL:0000056!3.92e-18!57;CL:0000355!3.92e-18!57;CL:0000187!4.45e-18!54;CL:0000183!1.56e-17!59;CL:0000192!1.05e-16!42;CL:0000514!1.05e-16!42;CL:0000393!3.76e-16!60;CL:0000211!3.76e-16!60;CL:0000048!5.02e-15!430;CL:0000723!4.06e-14!436;CL:0000034!2.59e-13!444;CL:0000359!5.75e-13!32;CL:0002620!5.90e-12!23;CL:0002334!7.05e-09!12;CL:0002371!2.31e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000499;8.19e-11;28!CL:0002334;1.04e-08;12!CL:0000327;1.15e-08;15!CL:0000057;3.46e-08;73!CL:0002620;5.45e-08;23!CL:0002320;2.24e-07;188!CL:0000359;4.12e-07;32 | |ontology_enrichment_celltype_v019=CL:0000499;8.19e-11;28!CL:0002334;1.04e-08;12!CL:0000327;1.15e-08;15!CL:0000057;3.46e-08;73!CL:0002620;5.45e-08;23!CL:0002320;2.24e-07;188!CL:0000359;4.12e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.19e-21,76;CL:0000048,1.99e-15,427;CL:0000723,8.18e-15,433;CL:0000034,5.04e-14,441;CL:0000499,6.67e-11,28;CL:0002320,7.28e-11,361;CL:0000134,1.78e-10,354;CL:0002334,7.82e-09,12;CL:0000327,1.18e-08,15;CL:0000219,4.09e-08,386;CL:0002620,6.83e-08,23;CL:0000192,7.15e-08,43;CL:0000514,7.15e-08,43;CL:0000359,2.44e-07,32;CL:0000136,4.75e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.87e-07!14 | |ontology_enrichment_disease=DOID:2394!2.87e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:17;5.29e-07;5!DOID:450;5.29e-07;5!DOID:66;5.29e-07;5!DOID:423;5.29e-07;5!DOID:0080000;5.29e-07;5!DOID:11722;5.29e-07;5 | |ontology_enrichment_disease_v019=DOID:17;5.29e-07;5!DOID:450;5.29e-07;5!DOID:66;5.29e-07;5!DOID:423;5.29e-07;5!DOID:0080000;5.29e-07;5!DOID:11722;5.29e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,7.76e-07,5;DOID:450,7.76e-07,5;DOID:66,7.76e-07,5;DOID:423,7.76e-07,5;DOID:0080000,7.76e-07,5;DOID:11722,7.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.12e-21!83;UBERON:0002329!6.12e-21!83;UBERON:0003077!6.12e-21!83;UBERON:0003059!6.12e-21!83;UBERON:0007282!6.12e-21!83;UBERON:0009618!6.12e-21!83;UBERON:0007285!6.12e-21!83;UBERON:0004290!9.87e-20!70;UBERON:0002385!1.58e-17!63;UBERON:0001015!1.58e-17!63;UBERON:0000383!1.58e-17!63;UBERON:0001134!4.00e-17!61;UBERON:0002036!4.00e-17!61;UBERON:0003082!4.00e-17!61;UBERON:0000486!3.47e-16!82;UBERON:0005256!1.70e-12!143;UBERON:0004872!1.46e-10!84;UBERON:0002199!1.68e-09!45;UBERON:0002416!1.68e-09!45;UBERON:0002100!1.79e-09!216;UBERON:0003102!5.76e-09!95;UBERON:0002097!5.84e-09!40;UBERON:0001637!8.81e-09!42;UBERON:0003509!8.81e-09!42;UBERON:0004572!8.81e-09!42;UBERON:0000475!6.11e-08!365;UBERON:0001135!3.54e-07!15;UBERON:0004573!5.07e-07!33;UBERON:0004571!5.07e-07!33;UBERON:0001981!5.99e-07!60;UBERON:0007500!5.99e-07!60;UBERON:0004537!5.99e-07!60;UBERON:0006965!5.99e-07!60;UBERON:0002049!7.24e-07!79;UBERON:0007798!7.24e-07!79 | |ontology_enrichment_uberon=UBERON:0000914!6.12e-21!83;UBERON:0002329!6.12e-21!83;UBERON:0003077!6.12e-21!83;UBERON:0003059!6.12e-21!83;UBERON:0007282!6.12e-21!83;UBERON:0009618!6.12e-21!83;UBERON:0007285!6.12e-21!83;UBERON:0004290!9.87e-20!70;UBERON:0002385!1.58e-17!63;UBERON:0001015!1.58e-17!63;UBERON:0000383!1.58e-17!63;UBERON:0001134!4.00e-17!61;UBERON:0002036!4.00e-17!61;UBERON:0003082!4.00e-17!61;UBERON:0000486!3.47e-16!82;UBERON:0005256!1.70e-12!143;UBERON:0004872!1.46e-10!84;UBERON:0002199!1.68e-09!45;UBERON:0002416!1.68e-09!45;UBERON:0002100!1.79e-09!216;UBERON:0003102!5.76e-09!95;UBERON:0002097!5.84e-09!40;UBERON:0001637!8.81e-09!42;UBERON:0003509!8.81e-09!42;UBERON:0004572!8.81e-09!42;UBERON:0000475!6.11e-08!365;UBERON:0001135!3.54e-07!15;UBERON:0004573!5.07e-07!33;UBERON:0004571!5.07e-07!33;UBERON:0001981!5.99e-07!60;UBERON:0007500!5.99e-07!60;UBERON:0004537!5.99e-07!60;UBERON:0006965!5.99e-07!60;UBERON:0002049!7.24e-07!79;UBERON:0007798!7.24e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.22e-10;9!UBERON:0000042;2.22e-10;9!UBERON:0003688;3.64e-09;6!UBERON:0002358;3.64e-09;6!UBERON:0003684;3.64e-09;6!UBERON:0001178;3.64e-09;6!UBERON:0002384;7.99e-08;198 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.22e-10;9!UBERON:0000042;2.22e-10;9!UBERON:0003688;3.64e-09;6!UBERON:0002358;3.64e-09;6!UBERON:0003684;3.64e-09;6!UBERON:0001178;3.64e-09;6!UBERON:0002384;7.99e-08;198 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.67e-10,371;UBERON:0003688,3.25e-09,6;UBERON:0002358,3.25e-09,6;UBERON:0003684,3.25e-09,6;UBERON:0001178,3.25e-09,6;UBERON:0002199,1.87e-08,46;UBERON:0002416,1.87e-08,46;UBERON:0003102,5.97e-08,99;UBERON:0004457,2.02e-07,12;UBERON:0000042,2.02e-07,12;UBERON:0002097,3.18e-07,41;UBERON:0001637,3.62e-07,42;UBERON:0003509,3.62e-07,42;UBERON:0004572,3.62e-07,42;UBERON:0004872,8.90e-07,83 | |||
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| ||
|short_description=p@chr7:94045713..94045725,+ | |short_description=p@chr7:94045713..94045725,+ | ||
}} | }} |
Latest revision as of 12:43, 31 July 2015
Short description: | p@chr7:94045713..94045725, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94045713..94045725, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.19e-21 | 76 |
multi fate stem cell | 1.99e-15 | 427 |
somatic stem cell | 8.18e-15 | 433 |
stem cell | 5.04e-14 | 441 |
stromal cell | 6.67e-11 | 28 |
connective tissue cell | 7.28e-11 | 361 |
mesenchymal cell | 1.78e-10 | 354 |
preadipocyte | 7.82e-09 | 12 |
extracellular matrix secreting cell | 1.18e-08 | 15 |
motile cell | 4.09e-08 | 386 |
skin fibroblast | 6.83e-08 | 23 |
smooth muscle cell | 7.15e-08 | 43 |
smooth muscle myoblast | 7.15e-08 | 43 |
vascular associated smooth muscle cell | 2.44e-07 | 32 |
fat cell | 4.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.67e-10 | 371 |
omentum | 3.25e-09 | 6 |
peritoneum | 3.25e-09 | 6 |
abdominal cavity | 3.25e-09 | 6 |
visceral peritoneum | 3.25e-09 | 6 |
integument | 1.87e-08 | 46 |
integumental system | 1.87e-08 | 46 |
surface structure | 5.97e-08 | 99 |
cavity lining | 2.02e-07 | 12 |
serous membrane | 2.02e-07 | 12 |
skin of body | 3.18e-07 | 41 |
artery | 3.62e-07 | 42 |
arterial blood vessel | 3.62e-07 | 42 |
arterial system | 3.62e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 8.90e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.76e-07 | 5 |
myotonic disease | 7.76e-07 | 5 |
muscle tissue disease | 7.76e-07 | 5 |
myopathy | 7.76e-07 | 5 |
muscular disease | 7.76e-07 | 5 |
myotonic dystrophy | 7.76e-07 | 5 |