FFCP PHASE1:Hg19::chr10:124050568..124050578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118663 | |EntrezGene=118663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26340 | |HGNC=26340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000507495_5end | |association_with_transcript=-17bp_to_ENST00000507495_5end | ||
|cluster_id=chr10:124050568..124050578,+ | |||
|coexpression_cluster_id=C2042 | |coexpression_cluster_id=C2042 | ||
|description=CAGE_peak_6_at_BTBD16_5end | |description=CAGE_peak_6_at_BTBD16_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000244!1.56e-33!4;CL:0000731!1.56e-33!4;CL:0002178!1.16e-11!3;CL:0000312!2.76e-07!5 | |ontology_enrichment_celltype=CL:0000244!1.56e-33!4;CL:0000731!1.56e-33!4;CL:0002178!1.16e-11!3;CL:0000312!2.76e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.27e-88;4!CL:0000731;6.27e-88;4!CL:1000415;1.48e-12;2!CL:0002178;1.35e-08;3 | |ontology_enrichment_celltype_v019=CL:0000244;6.27e-88;4!CL:0000731;6.27e-88;4!CL:1000415;1.48e-12;2!CL:0002178;1.35e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.02e-88,4;CL:0000731,7.02e-88,4;CL:1000415,1.48e-12,2;CL:0002178,1.21e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;3.06e-12;2 | |ontology_enrichment_disease_v019=DOID:3493;3.06e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.59e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!6.82e-27!5;UBERON:0005910!1.86e-22!6;UBERON:0001008!1.59e-10!45;UBERON:0007029!1.12e-09!1;UBERON:0000996!2.16e-09!1;UBERON:0006554!2.54e-08!44 | |ontology_enrichment_uberon=UBERON:0000365!6.82e-27!5;UBERON:0005910!1.86e-22!6;UBERON:0001008!1.59e-10!45;UBERON:0007029!1.12e-09!1;UBERON:0000996!2.16e-09!1;UBERON:0006554!2.54e-08!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.66e-70;5!UBERON:0005910;6.93e-59;6!UBERON:0000486;8.84e-30;12!UBERON:0007029;2.62e-23;1!UBERON:0006554;1.51e-18;30!UBERON:0001008;1.51e-18;30!UBERON:0001255;3.06e-12;2!UBERON:0001556;3.06e-12;2!UBERON:0005911;1.28e-11;36!UBERON:0002110;8.31e-09;3!UBERON:0000014;8.14e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000365;1.66e-70;5!UBERON:0005910;6.93e-59;6!UBERON:0000486;8.84e-30;12!UBERON:0007029;2.62e-23;1!UBERON:0006554;1.51e-18;30!UBERON:0001008;1.51e-18;30!UBERON:0001255;3.06e-12;2!UBERON:0001556;3.06e-12;2!UBERON:0005911;1.28e-11;36!UBERON:0002110;8.31e-09;3!UBERON:0000014;8.14e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.81e-70,5;UBERON:0005910,7.47e-59,6;UBERON:0007029,2.62e-23,1;UBERON:0001255,3.62e-12,2;UBERON:0001556,3.62e-12,2;UBERON:0006554,6.68e-12,47;UBERON:0001008,1.17e-11,48;UBERON:0005911,1.02e-09,82;UBERON:0002110,8.31e-09,3;UBERON:0006242,8.31e-09,3;UBERON:0004119,1.53e-08,160;UBERON:0000925,1.53e-08,160;UBERON:0006595,1.53e-08,160;UBERON:0000014,8.14e-07,4 | |||
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|short_description=p6@BTBD16 | |short_description=p6@BTBD16 | ||
}} | }} |
Latest revision as of 20:12, 16 September 2015
Short description: | p6@BTBD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BTBD16_5end |
Coexpression cluster: | C2042_Urothelial_gall_adenocarcinoma_choriocarcinoma_signet_gastric_bladder |
Association with transcript: | -17bp_to_ENST00000507495_5end |
EntrezGene: | BTBD16 |
HGNC: | 26340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.02e-88 | 4 |
urothelial cell | 7.02e-88 | 4 |
epithelial cell of gall bladder | 1.48e-12 | 2 |
epithelial cell of stomach | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.81e-70 | 5 |
transitional epithelium | 7.47e-59 | 6 |
surface | 2.62e-23 | 1 |
urinary bladder | 3.62e-12 | 2 |
lower urinary tract | 3.62e-12 | 2 |
urinary system structure | 6.68e-12 | 47 |
renal system | 1.17e-11 | 48 |
endo-epithelium | 1.02e-09 | 82 |
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
endoderm-derived structure | 1.53e-08 | 160 |
endoderm | 1.53e-08 | 160 |
presumptive endoderm | 1.53e-08 | 160 |
zone of skin | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.59e-12 | 2 |