FFCP PHASE1:Hg19::chr21:41002196..41002235,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:41002196..41002235,+
|short_description=p5@B3GALT5
|description=CAGE_peak_5_at_B3GALT5_5end
|association_with_transcript=0bp_to_ENST00000416555,uc002yyg.1...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10317 | |EntrezGene=10317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=920 | |HGNC=920 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000416555,uc002yyg.1,uc010gol.1_5end | |||
|cluster_id=chr21:41002196..41002235,+ | |||
|description=CAGE_peak_5_at_B3GALT5_5end | |||
|id=chr21:41002196..41002235,+ | |||
|ontology_enrichment_celltype=CL:1000497!3.29e-15!18;CL:0002518!3.29e-15!18;CL:1000507!1.61e-13!12;CL:1000494!1.61e-13!12;CL:1000449!9.88e-12!16;CL:0000066!1.56e-09!254;CL:0002620!6.79e-08!23;CL:0002681!4.15e-07!13;CL:0002584!4.15e-07!13;CL:0000064!6.75e-07!3;CL:0005012!6.75e-07!3;CL:0000067!6.75e-07!3;CL:0002304!6.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.70e-22;17!CL:0002518;1.70e-22;17!CL:1000507;8.73e-20;10!CL:1000494;8.73e-20;10!CL:1000449;3.72e-13;15!CL:0000239;9.55e-12;3!CL:1000615;9.55e-12;3!CL:0002306;9.55e-12;3!CL:0002573;1.68e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.47e-22,17;CL:0002518,1.47e-22,17;CL:1000507,7.04e-20,10;CL:1000494,7.04e-20,10;CL:1000449,3.23e-13,15;CL:0000239,8.83e-12,3;CL:1000615,8.83e-12,3;CL:0002306,8.83e-12,3;CL:0002573,3.01e-11,2;CL:0000066,2.84e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.19e-08!106;DOID:0050687!4.41e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.64e-17;2!DOID:299;4.91e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.68e-17,2;DOID:299,4.17e-11,25;DOID:305,1.13e-10,106;DOID:0050687,1.29e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.97e-16!44;UBERON:0001008!6.29e-16!45;UBERON:0000058!2.50e-15!26;UBERON:0003064!9.39e-15!37;UBERON:0009773!1.61e-13!12;UBERON:0001231!1.61e-13!12;UBERON:0004810!1.61e-13!12;UBERON:0004211!9.88e-12!16;UBERON:0001285!9.88e-12!16;UBERON:0007684!9.88e-12!16;UBERON:0003220!9.88e-12!16;UBERON:0004208!9.88e-12!16;UBERON:0000475!2.08e-11!365;UBERON:0000489!3.53e-11!32;UBERON:0006555!6.73e-11!17;UBERON:0005103!6.73e-11!17;UBERON:0000083!6.73e-11!17;UBERON:0009201!6.73e-11!17;UBERON:0004819!6.73e-11!17;UBERON:0006553!6.73e-11!17;UBERON:0003074!6.73e-11!17;UBERON:0003060!6.73e-11!17;UBERON:0002113!1.62e-10!27;UBERON:0003918!1.62e-10!27;UBERON:0005095!1.62e-10!27;UBERON:0007687!1.62e-10!27;UBERON:0007625!1.81e-10!11;UBERON:0000080!3.69e-10!18;UBERON:0002120!3.69e-10!18;UBERON:0004875!3.69e-10!18;UBERON:0005721!3.69e-10!18;UBERON:0005754!3.69e-10!18;UBERON:0007297!3.69e-10!18;UBERON:0003104!5.15e-10!238;UBERON:0009142!5.15e-10!238;UBERON:0002100!1.20e-09!216;UBERON:0000481!2.00e-09!347;UBERON:0000162!3.12e-09!14;UBERON:0001353!3.12e-09!14;UBERON:0000163!3.12e-09!14;UBERON:0006866!3.12e-09!14;UBERON:0000164!3.12e-09!14;UBERON:0000931!3.12e-09!14;UBERON:0004876!6.60e-09!20;UBERON:0000488!8.20e-09!4;UBERON:0004122!1.68e-08!15;UBERON:0003887!2.26e-08!21;UBERON:0001046!4.17e-08!19;UBERON:0002367!1.73e-07!11;UBERON:0010147!1.73e-07!11;UBERON:0009846!1.73e-07!11;UBERON:0003353!1.73e-07!11;UBERON:0004902!1.73e-07!11;UBERON:0003820!1.73e-07!11;UBERON:0009847!1.73e-07!11;UBERON:0005256!2.23e-07!143;UBERON:0001225!4.15e-07!13;UBERON:0008987!4.15e-07!13;UBERON:0002114!5.80e-07!12;UBERON:0005177!6.27e-07!107;UBERON:0001264!6.62e-07!10;UBERON:0003922!6.62e-07!10;UBERON:0003923!6.62e-07!10;UBERON:0003924!6.62e-07!10;UBERON:0003921!6.62e-07!10;UBERON:0001778!6.75e-07!3;UBERON:0001775!6.75e-07!3;UBERON:0000019!6.88e-07!19;UBERON:0000047!6.88e-07!19;UBERON:0004088!6.88e-07!19;UBERON:0003072!6.88e-07!19;UBERON:0003071!6.88e-07!19;UBERON:0004128!6.88e-07!19;UBERON:0003937!8.93e-07!12;UBERON:0005399!8.93e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.73e-20;10!UBERON:0009773;8.73e-20;10!UBERON:0001231;8.73e-20;10!UBERON:0004810;8.73e-20;10!UBERON:0002113;1.01e-15;24!UBERON:0011143;1.01e-15;24!UBERON:0006555;3.72e-13;15!UBERON:0004819;3.72e-13;15!UBERON:0001285;3.72e-13;15!UBERON:0007684;3.72e-13;15!UBERON:0000489;7.01e-13;29!UBERON:0006554;2.00e-12;30!UBERON:0001008;2.00e-12;30!UBERON:0006853;9.55e-12;3!UBERON:0007685;9.55e-12;3!UBERON:0004134;9.55e-12;3!UBERON:0004913;3.00e-09;1!UBERON:0003703;3.00e-09;1!UBERON:0001174;3.00e-09;1!UBERON:0004914;3.00e-09;1!UBERON:0002394;4.98e-09;4!UBERON:0003928;4.98e-09;4!UBERON:0000058;7.07e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.04e-20,10;UBERON:0002113,1.70e-14,26;UBERON:0003918,1.70e-14,26;UBERON:0011143,1.70e-14,26;UBERON:0005095,1.70e-14,26;UBERON:0007687,1.70e-14,26;UBERON:0004211,3.23e-13,15;UBERON:0009773,3.23e-13,15;UBERON:0001231,3.23e-13,15;UBERON:0001285,3.23e-13,15;UBERON:0007684,3.23e-13,15;UBERON:0004208,3.23e-13,15;UBERON:0006555,2.21e-12,16;UBERON:0004819,2.21e-12,16;UBERON:0000489,4.94e-12,31;UBERON:0006853,8.83e-12,3;UBERON:0007685,8.83e-12,3;UBERON:0004134,8.83e-12,3;UBERON:0004913,5.28e-09,1;UBERON:0003703,5.28e-09,1;UBERON:0001174,5.28e-09,1;UBERON:0004914,5.28e-09,1;UBERON:0006554,1.15e-07,47;UBERON:0001008,1.72e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,1.35021065793013,0.194874010322397,0,0,0,0.710019185033229,0.403008392910561,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0.857839051492628,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.308061348417659,1.56869953835371,1.46139224653261,1.58327443339314,0,0,0.215915916102139,0,0.812839312631559,0.501689773854853,2.80363900349542,0,1.56712328305525,0,0,0.769350375349168,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,2.27308917445131,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,2.06697207638852,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,1.42304773014896,0.416024019039416,0,0.783939179315021,0.435296032902013,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0.72045208577053,0,0,0,0,0,0,0.104602846312333,0.815985741090574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.778619813244484,0.078493092850514,0,1.68163297988273,0,3.0229862770607,5.25526856675755,0,0,0,0,0,0,0,0,0,1.41998400876678,1.19298766662821,0,0,0,1.91107787795487,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82315897372553,5.85761976830928,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,5.4793373285018,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,1.35021065793013,0.194874010322397,0,0,0,0.710019185033229,0.403008392910561,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0.857839051492628,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.308061348417659,1.56869953835371,1.46139224653261,1.58327443339314,0,0,0.215915916102139,0,0.812839312631559,0.501689773854853,2.80363900349542,0,1.56712328305525,0,0,0.769350375349168,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,2.27308917445131,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,2.06697207638852,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,1.42304773014896,0.416024019039416,0,0.783939179315021,0.435296032902013,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0.72045208577053,0,0,0,0,0,0,0.104602846312333,0.815985741090574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.778619813244484,0.078493092850514,0,1.68163297988273,0,3.0229862770607,5.25526856675755,0,0,0,0,0,0,0,0,0,1.41998400876678,1.19298766662821,0,0,0,1.91107787795487,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82315897372553,5.85761976830928,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,5.4793373285018,0,0,0,0,0,0 | ||
|short_description=p5@B3GALT5 | |||
}} | }} |
Latest revision as of 11:43, 18 September 2015
Short description: | p5@B3GALT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_B3GALT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416555, uc002yyg.1, uc010gol.1_5end |
EntrezGene: | B3GALT5 |
HGNC: | 920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.47e-22 | 17 |
kidney epithelial cell | 1.47e-22 | 17 |
kidney tubule cell | 7.04e-20 | 10 |
nephron tubule epithelial cell | 7.04e-20 | 10 |
epithelial cell of nephron | 3.23e-13 | 15 |
brush border epithelial cell | 8.83e-12 | 3 |
kidney cortex tubule cell | 8.83e-12 | 3 |
epithelial cell of proximal tubule | 8.83e-12 | 3 |
Schwann cell | 3.01e-11 | 2 |
epithelial cell | 2.84e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 7.04e-20 | 10 |
kidney | 1.70e-14 | 26 |
kidney mesenchyme | 1.70e-14 | 26 |
upper urinary tract | 1.70e-14 | 26 |
kidney rudiment | 1.70e-14 | 26 |
kidney field | 1.70e-14 | 26 |
nephron epithelium | 3.23e-13 | 15 |
renal tubule | 3.23e-13 | 15 |
nephron tubule | 3.23e-13 | 15 |
nephron | 3.23e-13 | 15 |
uriniferous tubule | 3.23e-13 | 15 |
nephrogenic mesenchyme | 3.23e-13 | 15 |
excretory tube | 2.21e-12 | 16 |
kidney epithelium | 2.21e-12 | 16 |
cavitated compound organ | 4.94e-12 | 31 |
renal cortex tubule | 8.83e-12 | 3 |
region of nephron tubule | 8.83e-12 | 3 |
proximal tubule | 8.83e-12 | 3 |
hepatopancreatic ampulla | 5.28e-09 | 1 |
extrahepatic bile duct | 5.28e-09 | 1 |
common bile duct | 5.28e-09 | 1 |
duodenal papilla | 5.28e-09 | 1 |
urinary system structure | 1.15e-07 | 47 |
renal system | 1.72e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.68e-17 | 2 |
adenocarcinoma | 4.17e-11 | 25 |
carcinoma | 1.13e-10 | 106 |
cell type cancer | 1.29e-08 | 143 |