FFCP PHASE1:Hg19::chr10:73975453..73975466,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119504 | |EntrezGene=119504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26976 | |HGNC=26976 | ||
|TSSclassifier=strong | |||
|UniProt=C5H3H2,Q96DE5 | |UniProt=C5H3H2,Q96DE5 | ||
|association_with_transcript=-291bp_to_NM_001242546,NM_001242547,NM_001242548,NM_173473,NR_038391,NR_038392_5end | |association_with_transcript=-291bp_to_NM_001242546,NM_001242547,NM_001242548,NM_173473,NR_038391,NR_038392_5end | ||
|cluster_id=chr10:73975453..73975466,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_ANAPC16_5end | |description=CAGE_peak_4_at_ANAPC16_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!1.01e-29!18;CL:0000789!1.01e-29!18;CL:0002420!1.01e-29!18;CL:0002419!1.01e-29!18;CL:0000790!1.01e-29!18;CL:0000084!1.38e-29!25;CL:0000827!1.38e-29!25;CL:0000625!1.63e-22!11;CL:0000838!4.20e-18!52;CL:0000542!1.21e-17!53;CL:0000051!1.21e-17!53;CL:0002087!1.05e-13!119;CL:0000738!4.28e-12!140;CL:0000624!6.78e-11!6;CL:0002031!1.12e-10!124;CL:0000842!1.00e-08!3;CL:0000898!2.28e-08!3;CL:0000623!2.71e-08!3;CL:0000825!2.71e-08!3;CL:0000037!3.14e-08!172;CL:0000566!3.14e-08!172;CL:0000988!2.52e-07!182;CL:0002032!9.02e-07!165;CL:0000837!9.02e-07!165 | |ontology_enrichment_celltype=CL:0000791!1.01e-29!18;CL:0000789!1.01e-29!18;CL:0002420!1.01e-29!18;CL:0002419!1.01e-29!18;CL:0000790!1.01e-29!18;CL:0000084!1.38e-29!25;CL:0000827!1.38e-29!25;CL:0000625!1.63e-22!11;CL:0000838!4.20e-18!52;CL:0000542!1.21e-17!53;CL:0000051!1.21e-17!53;CL:0002087!1.05e-13!119;CL:0000738!4.28e-12!140;CL:0000624!6.78e-11!6;CL:0002031!1.12e-10!124;CL:0000842!1.00e-08!3;CL:0000898!2.28e-08!3;CL:0000623!2.71e-08!3;CL:0000825!2.71e-08!3;CL:0000037!3.14e-08!172;CL:0000566!3.14e-08!172;CL:0000988!2.52e-07!182;CL:0002032!9.02e-07!165;CL:0000837!9.02e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.09e-50;18!CL:0000789;1.09e-50;18!CL:0002419;1.09e-50;18!CL:0000084;5.83e-44;25!CL:0000625;3.00e-41;11!CL:0000624;1.03e-14;6!CL:0000226;8.98e-14;3!CL:0000842;8.98e-14;3!CL:0000542;6.19e-12;53 | |ontology_enrichment_celltype_v019=CL:0000791;1.09e-50;18!CL:0000789;1.09e-50;18!CL:0002419;1.09e-50;18!CL:0000084;5.83e-44;25!CL:0000625;3.00e-41;11!CL:0000624;1.03e-14;6!CL:0000226;8.98e-14;3!CL:0000842;8.98e-14;3!CL:0000542;6.19e-12;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.97e-51,18;CL:0000789,7.97e-51,18;CL:0002420,7.97e-51,18;CL:0002419,7.97e-51,18;CL:0000790,7.97e-51,18;CL:0000084,4.57e-44,25;CL:0000827,4.57e-44,25;CL:0000625,3.02e-41,11;CL:0000838,2.28e-20,52;CL:0000542,5.94e-20,53;CL:0000051,5.94e-20,53;CL:0000624,7.75e-15,6;CL:0000226,1.02e-13,3;CL:0000842,1.02e-13,3;CL:0002087,9.55e-12,115;CL:0000738,1.27e-09,136;CL:0002031,8.51e-08,120;CL:0000037,2.12e-07,168;CL:0000988,6.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-50;18!CL:0000051;6.19e-12;53 | |ontology_enrichment_development_v019=CL:0000790;1.09e-50;18!CL:0000051;6.19e-12;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.39e-08!7 | |ontology_enrichment_uberon=UBERON:0004177!4.39e-08!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,1.7703879310245,0,1.64481199199607,0.167186495390678,1.62961133316795,0.946895611469467,1.94826728407911,0,0.883817722424512,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,5.19002971067211,4.81573490561484,2.09071047609954,0.339928028092699,0.383220493601921,1.03088233644789,1.77113784413652,1.27426165729639,1.30216690771284,1.90090408889675,2.71035214339991,1.91979916731628,0,0.947109008176067,0.821127996921047,1.00803371612366,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.15714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19115887728894,0.411362273086194,0,0,0,0,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0.387533459016037,1.05527014302958,0,0.0636471582781649,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,1.7703879310245,0,1.64481199199607,0.167186495390678,1.62961133316795,0.946895611469467,1.94826728407911,0,0.883817722424512,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,5.19002971067211,4.81573490561484,2.09071047609954,0.339928028092699,0.383220493601921,1.03088233644789,1.77113784413652,1.27426165729639,1.30216690771284,1.90090408889675,2.71035214339991,1.91979916731628,0,0.947109008176067,0.821127996921047,1.00803371612366,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.15714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19115887728894,0.411362273086194,0,0,0,0,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0.387533459016037,1.05527014302958,0,0.0636471582781649,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p4@ANAPC16 | |short_description=p4@ANAPC16 | ||
}} | }} |
Latest revision as of 05:16, 19 September 2015
Short description: | p4@ANAPC16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ANAPC16_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -291bp_to_NM_001242546, NM_001242547, NM_001242548, NM_173473, NR_038391, NR_038392_5end |
EntrezGene: | ANAPC16 |
HGNC: | 26976 |
UniProt: | C5H3H2Q96DE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.97e-51 | 18 |
alpha-beta T cell | 7.97e-51 | 18 |
immature T cell | 7.97e-51 | 18 |
mature T cell | 7.97e-51 | 18 |
immature alpha-beta T cell | 7.97e-51 | 18 |
T cell | 4.57e-44 | 25 |
pro-T cell | 4.57e-44 | 25 |
CD8-positive, alpha-beta T cell | 3.02e-41 | 11 |
lymphoid lineage restricted progenitor cell | 2.28e-20 | 52 |
lymphocyte | 5.94e-20 | 53 |
common lymphoid progenitor | 5.94e-20 | 53 |
CD4-positive, alpha-beta T cell | 7.75e-15 | 6 |
single nucleate cell | 1.02e-13 | 3 |
mononuclear cell | 1.02e-13 | 3 |
nongranular leukocyte | 9.55e-12 | 115 |
leukocyte | 1.27e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 8.51e-08 | 120 |
hematopoietic stem cell | 2.12e-07 | 168 |
hematopoietic cell | 6.41e-07 | 177 |