FFCP PHASE1:Hg19::chr6:2714658..2714663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:2714658..2714663,+ | |||
|description=CAGE_peak_at_chr6:2714658..2714663,+ | |description=CAGE_peak_at_chr6:2714658..2714663,+ | ||
|id=chr6:2714658..2714663,+ | |id=chr6:2714658..2714663,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.05e-08!682;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679 | |ontology_enrichment_celltype=CL:0000012!1.05e-08!682;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679 | ||
|ontology_enrichment_celltype_v019=CL:0000307;4.16e-09;3!CL:0000319;9.90e-08;1 | |ontology_enrichment_celltype_v019=CL:0000307;4.16e-09;3!CL:0000319;9.90e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.92e-09,3;CL:0000069,3.92e-09,3;CL:0000307,3.92e-09,3;CL:0000377,3.92e-09,3;CL:0000319,9.91e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000377;4.16e-09;3 | |ontology_enrichment_development_v019=CL:0000377;4.16e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;1.73e-12;2!DOID:1907;1.73e-12;2!DOID:201;2.12e-09;6!DOID:0060100;2.12e-09;6!DOID:3030;9.90e-08;1!DOID:0060085;1.63e-07;1!DOID:3165;1.63e-07;1!DOID:0060121;1.63e-07;1!DOID:2438;1.63e-07;1!DOID:4418;1.63e-07;1!DOID:3112;4.46e-07;1 | |ontology_enrichment_disease_v019=DOID:4231;1.73e-12;2!DOID:1907;1.73e-12;2!DOID:201;2.12e-09;6!DOID:0060100;2.12e-09;6!DOID:3030;9.90e-08;1!DOID:0060085;1.63e-07;1!DOID:3165;1.63e-07;1!DOID:0060121;1.63e-07;1!DOID:2438;1.63e-07;1!DOID:4418;1.63e-07;1!DOID:3112;4.46e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4231,1.45e-12,2;DOID:1907,1.45e-12,2;DOID:201,1.89e-09,6;DOID:0060100,1.89e-09,6;DOID:3030,9.91e-08,1;DOID:0060085,1.54e-07,1;DOID:3165,1.54e-07,1;DOID:0060121,1.54e-07,1;DOID:2438,1.54e-07,1;DOID:4418,1.54e-07,1;DOID:3112,3.02e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001280;1.28e-08;3!UBERON:0004647;1.28e-08;3!UBERON:0007195;2.16e-07;1!UBERON:0001282;4.46e-07;1!UBERON:0009842;4.46e-07;1!UBERON:0003704;4.46e-07;1!UBERON:0001171;4.46e-07;1!UBERON:0001172;4.46e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001280;1.28e-08;3!UBERON:0004647;1.28e-08;3!UBERON:0007195;2.16e-07;1!UBERON:0001282;4.46e-07;1!UBERON:0009842;4.46e-07;1!UBERON:0003704;4.46e-07;1!UBERON:0001171;4.46e-07;1!UBERON:0001172;4.46e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.35e-09,6;UBERON:0003928,4.35e-09,6;UBERON:0001280,1.62e-08,3;UBERON:0004647,1.62e-08,3;UBERON:0005171,1.62e-08,3;UBERON:0007195,2.37e-07,1;UBERON:0001282,6.97e-07,1;UBERON:0009842,6.97e-07,1;UBERON:0003704,6.97e-07,1;UBERON:0001171,6.97e-07,1;UBERON:0001172,6.97e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.469737994575059,0,0.702254033511242,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0,1.04007436911366,0.514414748524284,0,1.5985330740966,0.142977993658148,0,0.823240336780769,0,0,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0.082509499920588,0,0.650060246036521,0,0,0.924291702687866,0.767518373630648,2.06754858726796,0.107420244868274,0,0.426133137080504,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,2.68120910214315,3.26672954583968,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,6.86112604746889,0,0,0,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0.201799707191048,0,2.74804275804612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,1.16828856491525,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0,0.503464760927528,1.89753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.164230914106418,0,0,0,4.65942543798953,3.7755776223568,0,0,0.160317640503067,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0.543616824294456,0.836822770498666,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,2.39460383124975,4.59718116196298,0.170388021785422,1.24643300672138,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.624902039810533,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.50313580350515,0,0,0.302461847526478,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0.214821114084977,0,0,4.00027764663154,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0.489473409012935,0.358177682162975,0,0,0,1.15748422962549,0.675769762612291,0,0,0,0,0,0,0,0,9.33937053264133,0.211312123358627,0,0,0,1.13503190713367,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0.80682027481408,0,0,1.80149109261106,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.511280428554946,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41079230602953,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,4.48527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.469737994575059,0,0.702254033511242,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0,1.04007436911366,0.514414748524284,0,1.5985330740966,0.142977993658148,0,0.823240336780769,0,0,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0.082509499920588,0,0.650060246036521,0,0,0.924291702687866,0.767518373630648,2.06754858726796,0.107420244868274,0,0.426133137080504,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,2.68120910214315,3.26672954583968,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,6.86112604746889,0,0,0,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0.201799707191048,0,2.74804275804612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,1.16828856491525,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0,0.503464760927528,1.89753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.164230914106418,0,0,0,4.65942543798953,3.7755776223568,0,0,0.160317640503067,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0.543616824294456,0.836822770498666,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,2.39460383124975,4.59718116196298,0.170388021785422,1.24643300672138,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.624902039810533,0,0,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.50313580350515,0,0,0.302461847526478,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0.214821114084977,0,0,4.00027764663154,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0.489473409012935,0.358177682162975,0,0,0,1.15748422962549,0.675769762612291,0,0,0,0,0,0,0,0,9.33937053264133,0.211312123358627,0,0,0,1.13503190713367,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0.80682027481408,0,0,1.80149109261106,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.511280428554946,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41079230602953,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,4.48527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:2714658..2714663,+ | |short_description=p@chr6:2714658..2714663,+ | ||
}} | }} |
Latest revision as of 23:04, 30 July 2015
Short description: | p@chr6:2714658..2714663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:2714658..2714663, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.92e-09 | 3 |
branched duct epithelial cell | 3.92e-09 | 3 |
tracheal epithelial cell | 3.92e-09 | 3 |
tracheoblast | 3.92e-09 | 3 |
mucus secreting cell | 9.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.35e-09 | 6 |
digestive system duct | 4.35e-09 | 6 |
liver parenchyma | 1.62e-08 | 3 |
liver lobule | 1.62e-08 | 3 |
hepatic duct | 1.62e-08 | 3 |
stroma of bone marrow | 2.37e-07 | 1 |
intralobular bile duct | 6.97e-07 | 1 |
acinus | 6.97e-07 | 1 |
intrahepatic bile duct | 6.97e-07 | 1 |
portal lobule | 6.97e-07 | 1 |
hepatic acinus | 6.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.45e-12 | 2 |
malignant fibroxanthoma | 1.45e-12 | 2 |
connective tissue cancer | 1.89e-09 | 6 |
musculoskeletal system cancer | 1.89e-09 | 6 |
mucinous adenocarcinoma | 9.91e-08 | 1 |
organ system benign neoplasm | 1.54e-07 | 1 |
skin benign neoplasm | 1.54e-07 | 1 |
integumentary system benign neoplasm | 1.54e-07 | 1 |
dermis tumor | 1.54e-07 | 1 |
cutaneous fibrous histiocytoma | 1.54e-07 | 1 |
papillary adenocarcinoma | 3.02e-07 | 1 |