FFCP PHASE1:Hg19::chr21:45228890..45228908,-: Difference between revisions
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|id=chr21:45228890..45228908,-
|short_description=p@chr21:45228890..45228908,-
|description=CAGE_peak_at_chr21:45228890..45228908,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:45228890..45228908,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_at_chr21:45228890..45228908,- | |||
|id=chr21:45228890..45228908,- | |||
|ontology_enrichment_celltype=CL:0000819!4.23e-13!1;CL:0000785!3.48e-07!2;CL:0000955!3.48e-07!2;CL:0000818!3.48e-07!2;CL:0000954!3.48e-07!2;CL:0000816!3.48e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.18e-26;2!UBERON:0004872;2.35e-08;7 | |||
|ontology_enrichment_disease=DOID:12603!3.76e-13!1;DOID:0060073!4.23e-13!1;DOID:8675!4.23e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!6.87e-36!3;UBERON:0004054!6.87e-36!3;UBERON:0005904!4.13e-27!4;UBERON:0004177!7.90e-16!7;UBERON:0000998!2.95e-13!1;UBERON:0006868!2.95e-13!1;UBERON:0001000!3.33e-13!1;UBERON:0005352!3.33e-13!1;UBERON:0001301!4.77e-13!1;UBERON:0002370!4.78e-13!4;UBERON:0005058!4.78e-13!4;UBERON:0009113!4.78e-13!4;UBERON:0003295!4.78e-13!4;UBERON:0005562!4.78e-13!4;UBERON:0002372!6.06e-13!1;UBERON:0001961!6.06e-13!1;UBERON:0001744!6.06e-13!1;UBERON:0001735!6.06e-13!1;UBERON:0001042!2.55e-11!10;UBERON:0009145!2.55e-11!10;UBERON:0006562!2.43e-10!11;UBERON:0003135!2.94e-10!11;UBERON:0003351!5.35e-09!6;UBERON:0001875!2.74e-07!2;UBERON:0006514!2.74e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-98;2!UBERON:0005058;1.55e-98;2!UBERON:0009113;1.55e-98;2!UBERON:0004177;2.71e-40;5!UBERON:0005057;2.71e-40;5!UBERON:0000077;2.14e-08;27!UBERON:0002405;2.14e-08;27!UBERON:0001638;8.85e-07;9!UBERON:0003920;8.85e-07;9!UBERON:0004582;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-50,4;UBERON:0005058,5.14e-50,4;UBERON:0009113,5.14e-50,4;UBERON:0003295,5.14e-50,4;UBERON:0005562,5.14e-50,4;UBERON:0003351,8.35e-34,6;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000974,8.54e-21,10;UBERON:0003408,8.54e-21,10;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0009722,5.14e-19,11;UBERON:0007690,5.14e-19,11;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0004807,3.92e-08,28;UBERON:0000077,6.91e-08,29;UBERON:0001638,8.85e-07,9;UBERON:0003920,8.85e-07,9;UBERON:0004582,8.85e-07,9 | |||
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|short_description=p@chr21:45228890..45228908,- | |||
}} | }} |
Latest revision as of 18:21, 28 July 2015
Short description: | p@chr21:45228890..45228908, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:45228890..45228908, - |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.14e-50 | 4 |
hemolymphoid system gland | 5.14e-50 | 4 |
thymic region | 5.14e-50 | 4 |
pharyngeal gland | 5.14e-50 | 4 |
thymus primordium | 5.14e-50 | 4 |
pharyngeal epithelium | 8.35e-34 | 6 |
hemopoietic organ | 3.65e-29 | 7 |
immune organ | 3.65e-29 | 7 |
neck | 8.54e-21 | 10 |
gland of gut | 8.54e-21 | 10 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
entire pharyngeal arch endoderm | 5.14e-19 | 11 |
early pharyngeal endoderm | 5.14e-19 | 11 |
pharyngeal arch system | 4.55e-12 | 18 |
upper respiratory tract | 1.72e-11 | 19 |
respiratory system epithelium | 3.92e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |
vein | 8.85e-07 | 9 |
venous blood vessel | 8.85e-07 | 9 |
venous system | 8.85e-07 | 9 |