FFCP PHASE1:Hg19::chr2:165477971..165478015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2888 | |EntrezGene=2888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4565 | |HGNC=4565 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD37 | |UniProt=C9JD37 | ||
|association_with_transcript=0bp_to_ENST00000446413_5end | |association_with_transcript=0bp_to_ENST00000446413_5end | ||
|cluster_id=chr2:165477971..165478015,- | |||
|description=CAGE_peak_1_at_GRB14_5end | |description=CAGE_peak_1_at_GRB14_5end | ||
|id=chr2:165477971..165478015,- | |id=chr2:165477971..165478015,- | ||
|ontology_enrichment_celltype=CL:0000066!5.19e-13!254;CL:0002321!2.40e-10!248;CL:0000220!9.32e-10!246;CL:0000359!6.29e-09!32;CL:1000497!4.51e-07!18;CL:0002518!4.51e-07!18;CL:0000222!7.47e-07!119 | |ontology_enrichment_celltype=CL:0000066!5.19e-13!254;CL:0002321!2.40e-10!248;CL:0000220!9.32e-10!246;CL:0000359!6.29e-09!32;CL:1000497!4.51e-07!18;CL:0002518!4.51e-07!18;CL:0000222!7.47e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.70e-09;32!CL:1000497;1.12e-08;17!CL:0002518;1.12e-08;17!CL:1000507;1.34e-08;10!CL:1000494;1.34e-08;10!CL:1000449;3.48e-07;15!CL:0000071;4.64e-07;18 | |ontology_enrichment_celltype_v019=CL:0000359;6.70e-09;32!CL:1000497;1.12e-08;17!CL:0002518;1.12e-08;17!CL:1000507;1.34e-08;10!CL:1000494;1.34e-08;10!CL:1000449;3.48e-07;15!CL:0000071;4.64e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.99e-09,253;CL:0000359,3.01e-09,32;CL:1000497,1.23e-08,17;CL:0002518,1.23e-08,17;CL:1000507,1.37e-08,10;CL:1000494,1.37e-08,10;CL:0002321,1.33e-07,250;CL:0000071,3.64e-07,18;CL:0002546,3.64e-07,18;CL:1000449,3.83e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;4.64e-07;18 | |ontology_enrichment_development_v019=CL:0002546;4.64e-07;18 | ||
|ontology_enrichment_disease=DOID:305!5.90e-09!106 | |ontology_enrichment_disease=DOID:305!5.90e-09!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.04e-13;33!UBERON:0004571;1.04e-13;33!UBERON:0001637;8.70e-12;42!UBERON:0003509;8.70e-12;42!UBERON:0004572;8.70e-12;42!UBERON:0007500;6.04e-09;56!UBERON:0001981;6.04e-09;56!UBERON:0004537;6.04e-09;56!UBERON:0003914;7.99e-09;74!UBERON:0002113;1.19e-08;24!UBERON:0011143;1.19e-08;24!UBERON:0004211;1.34e-08;10!UBERON:0009773;1.34e-08;10!UBERON:0001231;1.34e-08;10!UBERON:0004810;1.34e-08;10!UBERON:0000956;7.74e-08;25!UBERON:0000203;7.74e-08;25!UBERON:0000947;1.22e-07;21!UBERON:0010191;1.22e-07;21!UBERON:0000489;2.51e-07;29!UBERON:0006555;3.48e-07;15!UBERON:0004819;3.48e-07;15!UBERON:0001285;3.48e-07;15!UBERON:0007684;3.48e-07;15!UBERON:0004638;4.64e-07;18!UBERON:0001986;4.64e-07;18!UBERON:0004852;4.64e-07;18!UBERON:0000025;6.96e-07;93 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.04e-13;33!UBERON:0004571;1.04e-13;33!UBERON:0001637;8.70e-12;42!UBERON:0003509;8.70e-12;42!UBERON:0004572;8.70e-12;42!UBERON:0007500;6.04e-09;56!UBERON:0001981;6.04e-09;56!UBERON:0004537;6.04e-09;56!UBERON:0003914;7.99e-09;74!UBERON:0002113;1.19e-08;24!UBERON:0011143;1.19e-08;24!UBERON:0004211;1.34e-08;10!UBERON:0009773;1.34e-08;10!UBERON:0001231;1.34e-08;10!UBERON:0004810;1.34e-08;10!UBERON:0000956;7.74e-08;25!UBERON:0000203;7.74e-08;25!UBERON:0000947;1.22e-07;21!UBERON:0010191;1.22e-07;21!UBERON:0000489;2.51e-07;29!UBERON:0006555;3.48e-07;15!UBERON:0004819;3.48e-07;15!UBERON:0001285;3.48e-07;15!UBERON:0007684;3.48e-07;15!UBERON:0004638;4.64e-07;18!UBERON:0001986;4.64e-07;18!UBERON:0004852;4.64e-07;18!UBERON:0000025;6.96e-07;93 | ||
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| ||
|short_description=p1@GRB14 | |short_description=p1@GRB14 | ||
}} | }} |
Latest revision as of 22:58, 17 September 2015
Short description: | p1@GRB14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRB14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000446413_5end |
EntrezGene: | GRB14 |
HGNC: | 4565 |
UniProt: | C9JD37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.99e-09 | 253 |
vascular associated smooth muscle cell | 3.01e-09 | 32 |
kidney cell | 1.23e-08 | 17 |
kidney epithelial cell | 1.23e-08 | 17 |
kidney tubule cell | 1.37e-08 | 10 |
nephron tubule epithelial cell | 1.37e-08 | 10 |
embryonic cell | 1.33e-07 | 250 |
blood vessel endothelial cell | 3.64e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.64e-07 | 18 |
epithelial cell of nephron | 3.83e-07 | 15 |