FFCP PHASE1:Hg19::chr20:57429373..57429387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_ENST00000481768_5end | |association_with_transcript=149bp_to_ENST00000481768_5end | ||
|cluster_id=chr20:57429373..57429387,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_13_at_GNAS_5end | |description=CAGE_peak_13_at_GNAS_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!9.91e-13!5;CL:0000047!3.47e-07!8 | |ontology_enrichment_celltype=CL:0002322!9.91e-13!5;CL:0000047!3.47e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.39e-16;5!CL:0000047;8.72e-11;2!CL:0002321;2.50e-08;15 | |ontology_enrichment_celltype_v019=CL:0002322;1.39e-16;5!CL:0000047;8.72e-11;2!CL:0002321;2.50e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.30e-16,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.93e-07;1!UBERON:0008425;9.93e-07;1 | |ontology_enrichment_development_v019=UBERON:0003124;9.93e-07;1!UBERON:0008425;9.93e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p13@GNAS | |short_description=p13@GNAS | ||
}} | }} |
Latest revision as of 06:06, 17 September 2015
Short description: | p13@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GNAS_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 149bp_to_ENST00000481768_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.30e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
throat | 9.31e-12 | 2 |
muscle structure | 2.28e-11 | 2 |
muscle organ | 2.28e-11 | 2 |
locus ceruleus | 2.67e-11 | 2 |
brainstem nucleus | 2.67e-11 | 2 |
hindbrain nucleus | 2.67e-11 | 2 |
tongue | 2.49e-08 | 3 |
gustatory system | 2.49e-08 | 3 |
future tongue | 2.49e-08 | 3 |
brainstem | 3.43e-08 | 6 |
pons | 8.19e-08 | 3 |
chest muscle | 6.96e-07 | 1 |
respiratory system muscle | 6.96e-07 | 1 |
skeletal muscle of trunk | 6.96e-07 | 1 |
respiratory system skeletal muscle | 6.96e-07 | 1 |
thoracic segment muscle | 6.96e-07 | 1 |
chest organ | 6.96e-07 | 1 |
muscle of trunk | 6.96e-07 | 1 |
diaphragm | 6.96e-07 | 1 |
future diaphragm | 6.96e-07 | 1 |
surface | 7.77e-07 | 1 |