FFCP PHASE1:Hg19::chr8:42552533..42552542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1142 | |EntrezGene=1142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1963 | |HGNC=1963 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000531610,ENST00000534391_5end | |association_with_transcript=14bp_to_ENST00000531610,ENST00000534391_5end | ||
|cluster_id=chr8:42552533..42552542,+ | |||
|description=CAGE_peak_3_at_CHRNB3_5end | |description=CAGE_peak_3_at_CHRNB3_5end | ||
|id=chr8:42552533..42552542,+ | |id=chr8:42552533..42552542,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.35e-18;3!UBERON:0003056;1.03e-17;3 | |ontology_enrichment_development_v019=UBERON:0006215;7.35e-18;3!UBERON:0003056;1.03e-17;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@CHRNB3 | |short_description=p3@CHRNB3 | ||
}} | }} |
Latest revision as of 08:19, 18 September 2015
Short description: | p3@CHRNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRNB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000531610, ENST00000534391_5end |
EntrezGene: | CHRNB3 |
HGNC: | 1963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.69e-10 | 21 |
visual system | 1.69e-10 | 21 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |