FFCP PHASE1:Hg19::chr3:50198295..50198322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:50198295..50198322,+ | |||
|description=CAGE_peak_at_chr3:50198295..50198322,+ | |description=CAGE_peak_at_chr3:50198295..50198322,+ | ||
|id=chr3:50198295..50198322,+ | |id=chr3:50198295..50198322,+ | ||
|ontology_enrichment_celltype=CL:0000071!5.62e-17!18;CL:0002546!5.62e-17!18;CL:0002139!6.76e-14!24;CL:0000066!4.37e-12!254;CL:0000076!6.31e-12!62;CL:0002543!3.49e-10!6;CL:0000115!4.70e-10!35;CL:0000213!7.57e-10!57;CL:0000215!7.57e-10!57;CL:0002078!1.07e-09!44;CL:1000413!2.97e-09!9;CL:0002150!1.40e-08!3;CL:0000861!1.40e-08!3;CL:0002618!6.99e-08!3 | |ontology_enrichment_celltype=CL:0000071!5.62e-17!18;CL:0002546!5.62e-17!18;CL:0002139!6.76e-14!24;CL:0000066!4.37e-12!254;CL:0000076!6.31e-12!62;CL:0002543!3.49e-10!6;CL:0000115!4.70e-10!35;CL:0000213!7.57e-10!57;CL:0000215!7.57e-10!57;CL:0002078!1.07e-09!44;CL:1000413!2.97e-09!9;CL:0002150!1.40e-08!3;CL:0000861!1.40e-08!3;CL:0002618!6.99e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002543;4.24e-14;6!CL:0000071;1.69e-10;18!CL:0002139;5.04e-08;24!CL:0000115;5.39e-08;36!CL:0002618;7.02e-08;3 | |ontology_enrichment_celltype_v019=CL:0002543;4.24e-14;6!CL:0000071;1.69e-10;18!CL:0002139;5.04e-08;24!CL:0000115;5.39e-08;36!CL:0002618;7.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002543,3.97e-14,6;CL:0000071,1.72e-10,18;CL:0002546,1.72e-10,18;CL:0000115,3.81e-09,36;CL:0002139,5.11e-08,24;CL:0002618,6.34e-08,3;CL:0002078,2.24e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.71e-21;1!CL:0002546;1.69e-10;18 | |ontology_enrichment_development_v019=UBERON:0010227;5.71e-21;1!CL:0002546;1.69e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.62e-17!18;UBERON:0004638!5.62e-17!18;UBERON:0004852!5.62e-17!18;UBERON:0001737!3.10e-15!9;UBERON:0006914!2.48e-13!25;UBERON:0000487!2.65e-13!22;UBERON:0003915!2.97e-09!9;UBERON:0004700!2.97e-09!9;UBERON:0001917!2.97e-09!9;UBERON:0001557!6.95e-08!19;UBERON:0000477!7.56e-08!286;UBERON:0008947!7.67e-07!38;UBERON:0003258!7.67e-07!38;UBERON:0007023!7.67e-07!115 | |ontology_enrichment_uberon=UBERON:0001986!5.62e-17!18;UBERON:0004638!5.62e-17!18;UBERON:0004852!5.62e-17!18;UBERON:0001737!3.10e-15!9;UBERON:0006914!2.48e-13!25;UBERON:0000487!2.65e-13!22;UBERON:0003915!2.97e-09!9;UBERON:0004700!2.97e-09!9;UBERON:0001917!2.97e-09!9;UBERON:0001557!6.95e-08!19;UBERON:0000477!7.56e-08!286;UBERON:0008947!7.67e-07!38;UBERON:0003258!7.67e-07!38;UBERON:0007023!7.67e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;5.71e-21;1!UBERON:0000996;5.71e-21;1!UBERON:0002081;3.52e-11;2!UBERON:0004638;1.69e-10;18!UBERON:0001986;1.69e-10;18!UBERON:0004852;1.69e-10;18!UBERON:0001638;1.01e-09;9!UBERON:0003920;1.01e-09;9!UBERON:0004582;1.01e-09;9!UBERON:0000487;1.06e-08;22!UBERON:0004151;7.02e-08;3!UBERON:0006914;1.00e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002079;5.71e-21;1!UBERON:0000996;5.71e-21;1!UBERON:0002081;3.52e-11;2!UBERON:0004638;1.69e-10;18!UBERON:0001986;1.69e-10;18!UBERON:0004852;1.69e-10;18!UBERON:0001638;1.01e-09;9!UBERON:0003920;1.01e-09;9!UBERON:0004582;1.01e-09;9!UBERON:0000487;1.06e-08;22!UBERON:0004151;7.02e-08;3!UBERON:0006914;1.00e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,3.45e-21,1;UBERON:0002079,5.16e-21,1;UBERON:0002081,3.35e-11,2;UBERON:0010227,3.35e-11,2;UBERON:0004638,1.72e-10,18;UBERON:0001986,1.72e-10,18;UBERON:0004852,1.72e-10,18;UBERON:0001638,9.65e-10,9;UBERON:0003920,9.65e-10,9;UBERON:0004582,9.65e-10,9;UBERON:0000487,1.08e-08,22;UBERON:0004151,6.78e-08,3;UBERON:0006914,1.01e-07,25 | |||
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| ||
|short_description=p@chr3:50198295..50198322,+ | |short_description=p@chr3:50198295..50198322,+ | ||
}} | }} |
Latest revision as of 22:01, 29 July 2015
Short description: | p@chr3:50198295..50198322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:50198295..50198322, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 3.97e-14 | 6 |
blood vessel endothelial cell | 1.72e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.72e-10 | 18 |
endothelial cell | 3.81e-09 | 36 |
endothelial cell of vascular tree | 5.11e-08 | 24 |
endothelial cell of umbilical vein | 6.34e-08 | 3 |
meso-epithelial cell | 2.24e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
vagina | 3.45e-21 | 1 |
left cardiac atrium | 5.16e-21 | 1 |
cardiac atrium | 3.35e-11 | 2 |
future cardiac atrium | 3.35e-11 | 2 |
blood vessel endothelium | 1.72e-10 | 18 |
endothelium | 1.72e-10 | 18 |
cardiovascular system endothelium | 1.72e-10 | 18 |
vein | 9.65e-10 | 9 |
venous blood vessel | 9.65e-10 | 9 |
venous system | 9.65e-10 | 9 |
simple squamous epithelium | 1.08e-08 | 22 |
cardiac chamber | 6.78e-08 | 3 |
squamous epithelium | 1.01e-07 | 25 |