FFCP PHASE1:Hg19::chr4:36334205..36334210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:36334205..36334210,- | |||
|coexpression_cluster_id=C1218 | |coexpression_cluster_id=C1218 | ||
|description=CAGE_peak_at_chr4:36334205..36334210,- | |description=CAGE_peak_at_chr4:36334205..36334210,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.97e-19!24;CL:0000826!1.97e-19!24;CL:0000542!4.80e-18!53;CL:0000051!4.80e-18!53;CL:0000988!7.21e-17!182;CL:0000838!2.34e-16!52;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0002032!1.81e-14!165;CL:0000837!1.81e-14!165;CL:0000738!6.07e-12!140;CL:0002031!1.03e-10!124;CL:0002150!2.85e-10!3;CL:0000861!2.85e-10!3;CL:0002087!3.41e-10!119;CL:0000785!1.67e-08!2;CL:0000955!1.67e-08!2;CL:0000818!1.67e-08!2;CL:0000954!1.67e-08!2;CL:0000816!1.67e-08!2;CL:0000453!3.26e-07!5 | |ontology_enrichment_celltype=CL:0000945!1.97e-19!24;CL:0000826!1.97e-19!24;CL:0000542!4.80e-18!53;CL:0000051!4.80e-18!53;CL:0000988!7.21e-17!182;CL:0000838!2.34e-16!52;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0002032!1.81e-14!165;CL:0000837!1.81e-14!165;CL:0000738!6.07e-12!140;CL:0002031!1.03e-10!124;CL:0002150!2.85e-10!3;CL:0000861!2.85e-10!3;CL:0002087!3.41e-10!119;CL:0000785!1.67e-08!2;CL:0000955!1.67e-08!2;CL:0000818!1.67e-08!2;CL:0000954!1.67e-08!2;CL:0000816!1.67e-08!2;CL:0000453!3.26e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000946;8.10e-41;1!CL:0000786;8.10e-41;1!CL:0000084;4.61e-15;25!CL:0000542;1.44e-12;53!CL:0000945;1.27e-07;24 | |ontology_enrichment_celltype_v019=CL:0000946;8.10e-41;1!CL:0000786;8.10e-41;1!CL:0000084;4.61e-15;25!CL:0000542;1.44e-12;53!CL:0000945;1.27e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.91e-41,1;CL:0000786,9.91e-41,1;CL:0000980,9.91e-41,1;CL:0000785,3.81e-21,2;CL:0000955,3.81e-21,2;CL:0000818,3.81e-21,2;CL:0000954,3.81e-21,2;CL:0000816,3.81e-21,2;CL:0000838,1.25e-19,52;CL:0000542,2.83e-19,53;CL:0000051,2.83e-19,53;CL:0000084,4.40e-15,25;CL:0000827,4.40e-15,25;CL:0000817,1.40e-14,3;CL:0000236,2.51e-12,14;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136;CL:0000945,1.31e-07,24;CL:0000826,1.31e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000954;3.44e-21;2!CL:0000051;1.44e-12;53 | |ontology_enrichment_development_v019=CL:0000954;3.44e-21;2!CL:0000051;1.44e-12;53 | ||
|ontology_enrichment_disease=DOID:0060058!9.70e-17!10;DOID:2531!2.37e-14!51;DOID:0060083!2.37e-14!51 | |ontology_enrichment_disease=DOID:0060058!9.70e-17!10;DOID:2531!2.37e-14!51;DOID:0060083!2.37e-14!51 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.70e-40;1!DOID:0060061;2.70e-40;1!DOID:8691;2.70e-40;1!DOID:0060058;8.46e-17;10 | |ontology_enrichment_disease_v019=DOID:0060060;2.70e-40;1!DOID:0060061;2.70e-40;1!DOID:8691;2.70e-40;1!DOID:0060058;8.46e-17;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.21e-40,1;DOID:0060061,2.21e-40,1;DOID:8691,2.21e-40,1;DOID:0060058,8.13e-17,10;DOID:2531,8.40e-08,51;DOID:0060083,8.40e-08,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.382067028739756,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,2.47205811340139,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.635746315921515,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94331031418972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,1.79988656269437,0,0.344429959321631,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,3.57225361422916,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0.705789743431384,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr4:36334205..36334210,- | |short_description=p@chr4:36334205..36334210,- | ||
}} | }} |
Latest revision as of 04:54, 30 July 2015
Short description: | p@chr4:36334205..36334210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:36334205..36334210, - |
Coexpression cluster: | C1218_hairy_plasma_lymphoma_xeroderma_hereditary_mycosis_splenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.91e-41 | 1 |
plasma cell | 9.91e-41 | 1 |
plasmablast | 9.91e-41 | 1 |
mature B cell | 3.81e-21 | 2 |
pre-B-II cell | 3.81e-21 | 2 |
transitional stage B cell | 3.81e-21 | 2 |
small pre-B-II cell | 3.81e-21 | 2 |
immature B cell | 3.81e-21 | 2 |
lymphoid lineage restricted progenitor cell | 1.25e-19 | 52 |
lymphocyte | 2.83e-19 | 53 |
common lymphoid progenitor | 2.83e-19 | 53 |
T cell | 4.40e-15 | 25 |
pro-T cell | 4.40e-15 | 25 |
precursor B cell | 1.40e-14 | 3 |
B cell | 2.51e-12 | 14 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
lymphocyte of B lineage | 1.31e-07 | 24 |
pro-B cell | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.21e-40 | 1 |
cutaneous T cell lymphoma | 2.21e-40 | 1 |
mycosis fungoides | 2.21e-40 | 1 |
lymphoma | 8.13e-17 | 10 |
hematologic cancer | 8.40e-08 | 51 |
immune system cancer | 8.40e-08 | 51 |