FFCP PHASE1:Hg19::chr14:52174807..52174824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:52174807..52174824,+ | |||
|description=CAGE_peak_at_chr14:52174807..52174824,+ | |description=CAGE_peak_at_chr14:52174807..52174824,+ | ||
|id=chr14:52174807..52174824,+ | |id=chr14:52174807..52174824,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.43e-19!180;CL:0000057!4.47e-16!75;CL:0002620!1.84e-09!23;CL:0000192!7.58e-08!42;CL:0000514!7.58e-08!42;CL:0000680!7.71e-08!57;CL:0000056!7.71e-08!57;CL:0000355!7.71e-08!57;CL:0000220!9.63e-08!246;CL:0002321!1.14e-07!248;CL:0000359!1.53e-07!32;CL:0000187!7.58e-07!54 | |ontology_enrichment_celltype=CL:0000055!4.43e-19!180;CL:0000057!4.47e-16!75;CL:0002620!1.84e-09!23;CL:0000192!7.58e-08!42;CL:0000514!7.58e-08!42;CL:0000680!7.71e-08!57;CL:0000056!7.71e-08!57;CL:0000355!7.71e-08!57;CL:0000220!9.63e-08!246;CL:0002321!1.14e-07!248;CL:0000359!1.53e-07!32;CL:0000187!7.58e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.22e-12;23!CL:0000135;2.82e-08;3!CL:0000388;2.82e-08;3!CL:0002595;4.81e-08;5!CL:0000499;7.61e-08;28 | |ontology_enrichment_celltype_v019=CL:0002620;7.22e-12;23!CL:0000135;2.82e-08;3!CL:0000388;2.82e-08;3!CL:0002595;4.81e-08;5!CL:0000499;7.61e-08;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.15e-16,76;CL:0002620,5.93e-12,23;CL:0000135,2.81e-08,3;CL:0000388,2.81e-08,3;CL:0002595,3.71e-08,5;CL:0000499,8.31e-08,28;CL:0000723,1.67e-07,433;CL:0000048,2.45e-07,427;CL:0000034,4.24e-07,441 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.03e-11;5!DOID:450;1.03e-11;5!DOID:66;1.03e-11;5!DOID:423;1.03e-11;5!DOID:0080000;1.03e-11;5!DOID:11722;1.03e-11;5!DOID:0060084;2.03e-08;3!DOID:127;2.03e-08;3 | |ontology_enrichment_disease_v019=DOID:17;1.03e-11;5!DOID:450;1.03e-11;5!DOID:66;1.03e-11;5!DOID:423;1.03e-11;5!DOID:0080000;1.03e-11;5!DOID:11722;1.03e-11;5!DOID:0060084;2.03e-08;3!DOID:127;2.03e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.15e-12,5;DOID:450,8.15e-12,5;DOID:66,8.15e-12,5;DOID:423,8.15e-12,5;DOID:0080000,8.15e-12,5;DOID:11722,8.15e-12,5;DOID:0060084,1.41e-08,3;DOID:127,1.41e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.73e-13!95;UBERON:0000914!4.88e-11!83;UBERON:0002329!4.88e-11!83;UBERON:0003077!4.88e-11!83;UBERON:0003059!4.88e-11!83;UBERON:0007282!4.88e-11!83;UBERON:0009618!4.88e-11!83;UBERON:0007285!4.88e-11!83;UBERON:0000486!6.42e-10!82;UBERON:0002097!3.56e-09!40;UBERON:0002199!3.77e-09!45;UBERON:0002416!3.77e-09!45;UBERON:0004290!1.26e-08!70;UBERON:0000475!1.65e-08!365;UBERON:0001637!4.28e-08!42;UBERON:0003509!4.28e-08!42;UBERON:0004572!4.28e-08!42;UBERON:0002385!1.09e-07!63;UBERON:0001015!1.09e-07!63;UBERON:0000383!1.09e-07!63;UBERON:0001134!1.11e-07!61;UBERON:0002036!1.11e-07!61;UBERON:0003082!1.11e-07!61;UBERON:0005256!3.63e-07!143;UBERON:0002100!5.27e-07!216 | |ontology_enrichment_uberon=UBERON:0003102!5.73e-13!95;UBERON:0000914!4.88e-11!83;UBERON:0002329!4.88e-11!83;UBERON:0003077!4.88e-11!83;UBERON:0003059!4.88e-11!83;UBERON:0007282!4.88e-11!83;UBERON:0009618!4.88e-11!83;UBERON:0007285!4.88e-11!83;UBERON:0000486!6.42e-10!82;UBERON:0002097!3.56e-09!40;UBERON:0002199!3.77e-09!45;UBERON:0002416!3.77e-09!45;UBERON:0004290!1.26e-08!70;UBERON:0000475!1.65e-08!365;UBERON:0001637!4.28e-08!42;UBERON:0003509!4.28e-08!42;UBERON:0004572!4.28e-08!42;UBERON:0002385!1.09e-07!63;UBERON:0001015!1.09e-07!63;UBERON:0000383!1.09e-07!63;UBERON:0001134!1.11e-07!61;UBERON:0002036!1.11e-07!61;UBERON:0003082!1.11e-07!61;UBERON:0005256!3.63e-07!143;UBERON:0002100!5.27e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.52e-09;41!UBERON:0002199;1.30e-08;46!UBERON:0002416;1.30e-08;46!UBERON:0007846;2.82e-08;3!UBERON:0000043;2.82e-08;3!UBERON:0007845;2.82e-08;3!UBERON:0003834;4.81e-08;5!UBERON:0001533;4.81e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.52e-09;41!UBERON:0002199;1.30e-08;46!UBERON:0002416;1.30e-08;46!UBERON:0007846;2.82e-08;3!UBERON:0000043;2.82e-08;3!UBERON:0007845;2.82e-08;3!UBERON:0003834;4.81e-08;5!UBERON:0001533;4.81e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.41e-12,41;UBERON:0002199,6.86e-12,46;UBERON:0002416,6.86e-12,46;UBERON:0003102,5.92e-09,99;UBERON:0007846,2.81e-08,3;UBERON:0000043,2.81e-08,3;UBERON:0007845,2.81e-08,3;UBERON:0003834,3.71e-08,5;UBERON:0001533,3.71e-08,5 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0.422863212287913,1.0007329835313,0.893922188854576,2.61701557230111,0,0,0.261185628199839,0.245733936501509,0,0,0,0.990130823680373,0.331397375727916,0,1.20538905604795,1.46062018077475,1.46379839637152,0,0.204000691244253,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.01392563272577,0.795285947051099,1.94653948121054,0.283604451492204,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.626984899610432,0.516833518338658,0.35576626268671,0,0,0,0.976248230192678,0,1.62028389576352,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.886413581652058,0.662045904066094,1.14734648299525,0.354668382198357,2.24271040056923,2.1349799145941,1.48000529050296,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0.624320153660641,0.570471821544449,0.597794722207204,0,0,0.140450806702248,0.204154171254893,0.61417158655884,0.413303124703062,1.18800285728205,0.989067717114227,0,0,0,0.250237039743928,0,0.877955241761676,4.59731693698529,1.05166641234618,0.340296549480063,1.4351170855109,1.92201649936711,4.02670612203168,1.20036438433761,1.23663035086127,1.03056216018252,1.67505170698431,0.675105328965065,1.85130309806277,0.252433774244115,0.920498986422993,1.45481451136931,1.77504796258307,2.01504196455281,1.01736355386293,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0,0,0,0,0,1.56449532329816,2.57296375277154,0,1.85747171212792,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.201057944823262,0.555530670951178,0,0,0,0,0,0.721832238805369,0.462985512576611,1.33177906564219,0,0,0,0,0,0.93733833986777,1.17587489739202,0.283550194484773,0.806026704325635,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0.616964956219941,0.300343057843917,0.571652865261156,0,0,0.22001485746285,0.904902010304444,0,0.845302752556,0.531876233169741,3.12022310734098,0,0,0,0,0,0.823240336780769,0.977208552881205,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,1.88215698667853,0.61642896765115,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,1.45579603071565,8.02930449587228,2.52323864054295,0.234282829985426,0,0,0,0,0,0.781952530212746,0,0.343143423810856,0,0,0,0,0,0,2.23297027036899,0.460385919864187,4.77122160536225,0.512556597022804,0.511707249066704,1.76939313257968,0,0.462629081407967,1.06537035187876,0,1.03850885836724,0.929683027679674,0,1.60405176242628,0.276242966807689,0.68888668898764,2.54927635209404,0.786746489756545,0,0.770153371044148,0,0,0.527758144464379,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.457847324091717,0.41254749960294,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0,0.725083469571143,0.681813019328807,0.267096106940212,0.826424576804891,0.960950336825531,0.127612712494584,0.50578890427775,6.04299214086472,0.62962469366128,0.6970372701606,1.23213432070436,0,0.869932992075073,0.37064843820784,0.572499546967965,0,0,0.38126038784765,0,0,0,0.78494864019923,0.359744915166629,0.54907405947211,0.824686816419805,0,0,0.421258456238981,0,1.21856744815642,2.11300293513511,0.545999645631943,0.848432591722276,1.13008116620243,0,1.99031692572366,2.19225442626881,0,0,0.202910376962704,1.239293992399,0.563391205064483,0.573645408816206,0.687743287091848,0.35667105148125,1.06428319221179,1.26664581178598,1.31717957183961,0,0,0.0962221127255121,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0.306806047506464,0,6.84287092855976,0.179736702294654,0,0,0.394573622547734,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0.552896299656123,0,0,0,0.139423744278603,0.153900517007594,0.797594390929008,0,0.0897576444097721,0,0.957003479195758,0.824378340616761,1.5991043280559,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,1.24807205711825,0,0.0979923974143777,0.435296032902013,0,0.859930162358083,0.0967563312890851,0.0730893170861856,0,0.387956065953678,0,0.225980740780532,0.137041924646751,0.19871461170299,0.126621591911757,0,0.0801588202515337,0.426905989478705,0.999048047910651,0,0,0,0.432164393964449,0,0.235694034616795,0,0.104602846312333,0,0.288950589901519,0,0,0,0,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| ||
|short_description=p@chr14:52174807..52174824,+ | |short_description=p@chr14:52174807..52174824,+ | ||
}} | }} |
Latest revision as of 21:01, 24 July 2015
Short description: | p@chr14:52174807..52174824, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:52174807..52174824, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.15e-16 | 76 |
skin fibroblast | 5.93e-12 | 23 |
fibrocyte | 2.81e-08 | 3 |
tendon cell | 2.81e-08 | 3 |
smooth muscle cell of the subclavian artery | 3.71e-08 | 5 |
stromal cell | 8.31e-08 | 28 |
somatic stem cell | 1.67e-07 | 433 |
multi fate stem cell | 2.45e-07 | 427 |
stem cell | 4.24e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.41e-12 | 41 |
integument | 6.86e-12 | 46 |
integumental system | 6.86e-12 | 46 |
surface structure | 5.92e-09 | 99 |
dense regular connective tissue | 2.81e-08 | 3 |
tendon | 2.81e-08 | 3 |
regular connective tissue | 2.81e-08 | 3 |
thoracic segment blood vessel | 3.71e-08 | 5 |
subclavian artery | 3.71e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.15e-12 | 5 |
myotonic disease | 8.15e-12 | 5 |
muscle tissue disease | 8.15e-12 | 5 |
myopathy | 8.15e-12 | 5 |
muscular disease | 8.15e-12 | 5 |
myotonic dystrophy | 8.15e-12 | 5 |
cell type benign neoplasm | 1.41e-08 | 3 |
leiomyoma | 1.41e-08 | 3 |