FFCP PHASE1:Hg19::chr3:184097475..184097505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8646 | |EntrezGene=8646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1949 | |HGNC=1949 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2X0 | |UniProt=Q9H2X0 | ||
|association_with_transcript=-355bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | |association_with_transcript=-355bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | ||
|cluster_id=chr3:184097475..184097505,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_6_at_CHRD_5end | |description=CAGE_peak_6_at_CHRD_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.06e-10;3!CL:0000214;2.06e-10;3!CL:0002334;1.19e-09;12!CL:0002581;1.97e-08;1!CL:0000153;1.23e-07;9!CL:0000447;1.23e-07;9 | |ontology_enrichment_celltype_v019=CL:0002580;2.06e-10;3!CL:0000214;2.06e-10;3!CL:0002334;1.19e-09;12!CL:0002581;1.97e-08;1!CL:0000153;1.23e-07;9!CL:0000447;1.23e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.70e-10,3;CL:0000214,1.97e-10,3;CL:0002334,1.28e-09,12;CL:0002581,1.59e-08,1;CL:0000153,1.42e-07,9;CL:0000447,1.42e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.77e-23;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.77e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.97e-08;1!DOID:1357;1.97e-08;1 | |ontology_enrichment_disease_v019=DOID:0050619;1.97e-08;1!DOID:1357;1.97e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.27e-08,1;DOID:1357,1.27e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.20e-37!115;UBERON:0001049!4.83e-22!57;UBERON:0005068!4.83e-22!57;UBERON:0006241!4.83e-22!57;UBERON:0007135!4.83e-22!57;UBERON:0003075!3.39e-17!86;UBERON:0007284!3.39e-17!86;UBERON:0002616!3.63e-17!59;UBERON:0002346!9.84e-16!90;UBERON:0002020!1.10e-14!34;UBERON:0003528!1.10e-14!34;UBERON:0003080!1.11e-14!42;UBERON:0000955!1.17e-14!69;UBERON:0006238!1.17e-14!69;UBERON:0001017!2.00e-14!82;UBERON:0001893!5.02e-14!34;UBERON:0005743!6.32e-14!86;UBERON:0002780!9.25e-14!41;UBERON:0001890!9.25e-14!41;UBERON:0006240!9.25e-14!41;UBERON:0002791!2.05e-13!33;UBERON:0001869!3.77e-13!32;UBERON:0001950!1.16e-12!20;UBERON:0002619!1.42e-12!22;UBERON:0000956!1.63e-11!25;UBERON:0000203!1.63e-11!25;UBERON:0000073!2.56e-11!94;UBERON:0001016!2.56e-11!94;UBERON:0003056!1.26e-09!61;UBERON:0003076!8.15e-09!15;UBERON:0003057!8.15e-09!15;UBERON:0000033!3.75e-08!123;UBERON:0000153!3.45e-07!129;UBERON:0007811!3.45e-07!129;UBERON:0001871!3.75e-07!7;UBERON:0000475!6.42e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!8.20e-37!115;UBERON:0001049!4.83e-22!57;UBERON:0005068!4.83e-22!57;UBERON:0006241!4.83e-22!57;UBERON:0007135!4.83e-22!57;UBERON:0003075!3.39e-17!86;UBERON:0007284!3.39e-17!86;UBERON:0002616!3.63e-17!59;UBERON:0002346!9.84e-16!90;UBERON:0002020!1.10e-14!34;UBERON:0003528!1.10e-14!34;UBERON:0003080!1.11e-14!42;UBERON:0000955!1.17e-14!69;UBERON:0006238!1.17e-14!69;UBERON:0001017!2.00e-14!82;UBERON:0001893!5.02e-14!34;UBERON:0005743!6.32e-14!86;UBERON:0002780!9.25e-14!41;UBERON:0001890!9.25e-14!41;UBERON:0006240!9.25e-14!41;UBERON:0002791!2.05e-13!33;UBERON:0001869!3.77e-13!32;UBERON:0001950!1.16e-12!20;UBERON:0002619!1.42e-12!22;UBERON:0000956!1.63e-11!25;UBERON:0000203!1.63e-11!25;UBERON:0000073!2.56e-11!94;UBERON:0001016!2.56e-11!94;UBERON:0003056!1.26e-09!61;UBERON:0003076!8.15e-09!15;UBERON:0003057!8.15e-09!15;UBERON:0000033!3.75e-08!123;UBERON:0000153!3.45e-07!129;UBERON:0007811!3.45e-07!129;UBERON:0001871!3.75e-07!7;UBERON:0000475!6.42e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.42e-12;6!UBERON:0006915;2.06e-10;3!UBERON:0007616;2.06e-10;3!UBERON:0002217;2.06e-10;3!UBERON:0002018;2.06e-10;3!UBERON:0002134;7.83e-09;1!UBERON:0005208;7.83e-09;1!UBERON:0004145;7.83e-09;1!UBERON:0005946;7.83e-09;1!UBERON:0005965;7.83e-09;1!UBERON:0002078;7.83e-09;1!UBERON:0005795;1.97e-08;1!UBERON:0006834;1.97e-08;1!UBERON:0002171;1.97e-08;1!UBERON:0001764;1.97e-08;1!UBERON:0001825;1.97e-08;1!UBERON:0006518;1.97e-08;1!UBERON:0008949;1.97e-08;1!UBERON:0000101;1.97e-08;1!UBERON:0002167;1.97e-08;1!UBERON:0002680;4.25e-08;9!UBERON:0001895;4.25e-08;9!UBERON:0004457;1.23e-07;9!UBERON:0000042;1.23e-07;9!UBERON:0000310;4.99e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002037;6.42e-12;6!UBERON:0006915;2.06e-10;3!UBERON:0007616;2.06e-10;3!UBERON:0002217;2.06e-10;3!UBERON:0002018;2.06e-10;3!UBERON:0002134;7.83e-09;1!UBERON:0005208;7.83e-09;1!UBERON:0004145;7.83e-09;1!UBERON:0005946;7.83e-09;1!UBERON:0005965;7.83e-09;1!UBERON:0002078;7.83e-09;1!UBERON:0005795;1.97e-08;1!UBERON:0006834;1.97e-08;1!UBERON:0002171;1.97e-08;1!UBERON:0001764;1.97e-08;1!UBERON:0001825;1.97e-08;1!UBERON:0006518;1.97e-08;1!UBERON:0008949;1.97e-08;1!UBERON:0000101;1.97e-08;1!UBERON:0002167;1.97e-08;1!UBERON:0002680;4.25e-08;9!UBERON:0001895;4.25e-08;9!UBERON:0004457;1.23e-07;9!UBERON:0000042;1.23e-07;9!UBERON:0000310;4.99e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.09e-12,6;UBERON:0006215,6.09e-12,6;UBERON:0006915,1.97e-10,3;UBERON:0007616,1.97e-10,3;UBERON:0002217,1.97e-10,3;UBERON:0002018,1.97e-10,3;UBERON:0002134,8.78e-09,1;UBERON:0005208,8.78e-09,1;UBERON:0005946,8.78e-09,1;UBERON:0005965,8.78e-09,1;UBERON:0002078,8.78e-09,1;UBERON:0001764,1.27e-08,1;UBERON:0001825,1.27e-08,1;UBERON:0002171,2.46e-08,1;UBERON:0006518,2.46e-08,1;UBERON:0008949,2.46e-08,1;UBERON:0000101,2.46e-08,1;UBERON:0002167,2.46e-08,1;UBERON:0006834,2.64e-08,1;UBERON:0002680,4.10e-08,9;UBERON:0001895,4.10e-08,9;UBERON:0010092,4.10e-08,9;UBERON:0000310,4.65e-07,10 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.434539556882471,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.600952235626387,0,0.358779271377724,0.213557388818567,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0,0,0.757301322732344,0.368199594569197,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0,0.434418072340414,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,1.48864684691266,1.38115775959256,0.841980283299221,0.512556597022804,1.02341449813341,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0.994147647766298,0.422008249231538,0,0.329607748453519,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.556608588971108,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,4.5774520895125,10.5050296934663,2.65992857058193,0.438770794307945,0,0,0.846452843541768,0,1.38338342632836,0.0897576444097721,0.217294743844016,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,1.99052386215701,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0.698906672968121,0,0.0967563312890851,0,0,0.193978032976839,0.264768380074501,0.225980740780532,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0.114536596165916,0.514784993585894,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,2.15361907373044,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0,0.0846733320657845,0,0.408610218334727,0,0,0,0,0,0.607495566580247,0,0.394028536495991,0.262272940674991,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,1.72759505875258,0,0.854183854313742,1.752673029891,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,1.7973596699725,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.798169295285756,0.82046545696302,0.252071696221718,0.691572524642179,0.968853873791107,0,0,0,0,0,0,0,0,0.752103283492572,0,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,2.27355476151302,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,1.60710550763486,0.336283722218824,0,0.227662191351298,0,0,0,0.611727596791485,0.526182188502793,0,0,0.39246546425257,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0.490296643507811,0.471353094203252,0.392616934229891,0.297046400327086,0.4226557275834,0.509781344063451,0.187967835959707,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,0,0,0.371995018166751,3.23522940041993,0.432626562123789,0.252332849670158,0,0,0.101988829741982,0.26721740526556,0,0,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,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| ||
|short_description=p6@CHRD | |short_description=p6@CHRD | ||
}} | }} |
Latest revision as of 02:30, 17 September 2015
Short description: | p6@CHRD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHRD_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -355bp_to_ENST00000204604, ENST00000310236, ENST00000356534, ENST00000420973, ENST00000448472, ENST00000460627, NM_003741, uc003fov.2, uc003fow.2, uc003fox.2, uc003foy.2_5end |
EntrezGene: | CHRD |
HGNC: | 1949 |
UniProt: | Q9H2X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.70e-10 | 3 |
synovial cell | 1.97e-10 | 3 |
preadipocyte | 1.28e-09 | 12 |
perirenal preadipocyte | 1.59e-08 | 1 |
GAG secreting cell | 1.42e-07 | 9 |
carbohydrate secreting cell | 1.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.09e-12 | 6 |
rhombic lip | 6.09e-12 | 6 |
stratified squamous epithelium | 1.97e-10 | 3 |
layer of synovial tissue | 1.97e-10 | 3 |
synovial joint | 1.97e-10 | 3 |
synovial membrane of synovial joint | 1.97e-10 | 3 |
tricuspid valve | 8.78e-09 | 1 |
right atrium valve | 8.78e-09 | 1 |
outflow tract of atrium | 8.78e-09 | 1 |
outflow part of right atrium | 8.78e-09 | 1 |
right cardiac atrium | 8.78e-09 | 1 |
maxillary sinus | 1.27e-08 | 1 |
paranasal sinus | 1.27e-08 | 1 |
lower lobe of right lung | 2.46e-08 | 1 |
right lung lobe | 2.46e-08 | 1 |
lower lobe of lung | 2.46e-08 | 1 |
lobe of lung | 2.46e-08 | 1 |
right lung | 2.46e-08 | 1 |
uterus or analog | 2.64e-08 | 1 |
regional part of metencephalon | 4.10e-08 | 9 |
metencephalon | 4.10e-08 | 9 |
future metencephalon | 4.10e-08 | 9 |
breast | 4.65e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.27e-08 | 1 |
maxillary sinus cancer | 1.27e-08 | 1 |