FFCP PHASE1:Hg19::chr15:63674218..63674322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=771 | |EntrezGene=771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1371 | |HGNC=1371 | ||
|TSSclassifier=strong | |||
|UniProt=O43570 | |UniProt=O43570 | ||
|association_with_transcript=37bp_to_ENST00000178638_5end | |association_with_transcript=37bp_to_ENST00000178638_5end | ||
|cluster_id=chr15:63674218..63674322,- | |||
|description=CAGE_peak_2_at_CA12_5end | |description=CAGE_peak_2_at_CA12_5end | ||
|id=chr15:63674218..63674322,- | |id=chr15:63674218..63674322,- | ||
|ontology_enrichment_celltype=CL:0000055!1.66e-21!180;CL:0000057!1.77e-13!75;CL:0000680!9.81e-09!57;CL:0000056!9.81e-09!57;CL:0000355!9.81e-09!57;CL:0002620!3.08e-08!23;CL:0000187!5.68e-08!54;CL:0000183!1.19e-07!59;CL:0000393!2.26e-07!60;CL:0000211!2.26e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.66e-21!180;CL:0000057!1.77e-13!75;CL:0000680!9.81e-09!57;CL:0000056!9.81e-09!57;CL:0000355!9.81e-09!57;CL:0002620!3.08e-08!23;CL:0000187!5.68e-08!54;CL:0000183!1.19e-07!59;CL:0000393!2.26e-07!60;CL:0000211!2.26e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-09;23!CL:0000359;4.69e-07;32 | |ontology_enrichment_celltype_v019=CL:0002620;1.11e-09;23!CL:0000359;4.69e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.40e-13,76;CL:0002620,6.60e-10,23;CL:0000680,5.93e-09,58;CL:0000056,5.93e-09,58;CL:0000355,5.93e-09,58;CL:0000187,4.51e-08,55;CL:0000393,4.10e-07,61;CL:0000211,4.10e-07,61;CL:0000359,6.92e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.69e-21!365;UBERON:0003102!5.11e-14!95;UBERON:0000468!8.41e-12!659;UBERON:0000481!1.64e-11!347;UBERON:0000486!2.71e-11!82;UBERON:0000467!8.77e-11!625;UBERON:0000480!1.36e-10!626;UBERON:0000914!2.06e-10!83;UBERON:0002329!2.06e-10!83;UBERON:0003077!2.06e-10!83;UBERON:0003059!2.06e-10!83;UBERON:0007282!2.06e-10!83;UBERON:0009618!2.06e-10!83;UBERON:0007285!2.06e-10!83;UBERON:0000033!1.10e-09!123;UBERON:0004121!7.98e-09!169;UBERON:0004290!9.00e-09!70;UBERON:0000153!1.62e-08!129;UBERON:0007811!1.62e-08!129;UBERON:0002050!3.91e-08!605;UBERON:0005423!3.91e-08!605;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0000923!5.76e-08!604;UBERON:0005291!5.76e-08!604;UBERON:0006598!5.76e-08!604;UBERON:0002532!5.76e-08!604;UBERON:0002199!8.07e-08!45;UBERON:0002416!8.07e-08!45;UBERON:0000922!8.16e-08!612;UBERON:0001134!1.06e-07!61;UBERON:0002036!1.06e-07!61;UBERON:0003082!1.06e-07!61;UBERON:0002385!1.27e-07!63;UBERON:0001015!1.27e-07!63;UBERON:0000383!1.27e-07!63;UBERON:0000119!1.36e-07!312;UBERON:0000483!2.48e-07!309;UBERON:0001444!3.17e-07!48;UBERON:0005256!4.18e-07!143;UBERON:0002100!4.36e-07!216;UBERON:0002097!8.82e-07!40 | |ontology_enrichment_uberon=UBERON:0000475!4.69e-21!365;UBERON:0003102!5.11e-14!95;UBERON:0000468!8.41e-12!659;UBERON:0000481!1.64e-11!347;UBERON:0000486!2.71e-11!82;UBERON:0000467!8.77e-11!625;UBERON:0000480!1.36e-10!626;UBERON:0000914!2.06e-10!83;UBERON:0002329!2.06e-10!83;UBERON:0003077!2.06e-10!83;UBERON:0003059!2.06e-10!83;UBERON:0007282!2.06e-10!83;UBERON:0009618!2.06e-10!83;UBERON:0007285!2.06e-10!83;UBERON:0000033!1.10e-09!123;UBERON:0004121!7.98e-09!169;UBERON:0004290!9.00e-09!70;UBERON:0000153!1.62e-08!129;UBERON:0007811!1.62e-08!129;UBERON:0002050!3.91e-08!605;UBERON:0005423!3.91e-08!605;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0000923!5.76e-08!604;UBERON:0005291!5.76e-08!604;UBERON:0006598!5.76e-08!604;UBERON:0002532!5.76e-08!604;UBERON:0002199!8.07e-08!45;UBERON:0002416!8.07e-08!45;UBERON:0000922!8.16e-08!612;UBERON:0001134!1.06e-07!61;UBERON:0002036!1.06e-07!61;UBERON:0003082!1.06e-07!61;UBERON:0002385!1.27e-07!63;UBERON:0001015!1.27e-07!63;UBERON:0000383!1.27e-07!63;UBERON:0000119!1.36e-07!312;UBERON:0000483!2.48e-07!309;UBERON:0001444!3.17e-07!48;UBERON:0005256!4.18e-07!143;UBERON:0002100!4.36e-07!216;UBERON:0002097!8.82e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.78e-07;46!UBERON:0002416;2.78e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0002199;2.78e-07;46!UBERON:0002416;2.78e-07;46 | ||
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| ||
|short_description=p2@CA12 | |short_description=p2@CA12 | ||
}} | }} |
Latest revision as of 12:25, 18 September 2015
Short description: | p2@CA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CA12_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000178638_5end |
EntrezGene: | CA12 |
HGNC: | 1371 |
UniProt: | O43570 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.40e-13 | 76 |
skin fibroblast | 6.60e-10 | 23 |
muscle precursor cell | 5.93e-09 | 58 |
myoblast | 5.93e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-09 | 58 |
muscle cell | 4.51e-08 | 55 |
electrically responsive cell | 4.10e-07 | 61 |
electrically active cell | 4.10e-07 | 61 |
vascular associated smooth muscle cell | 6.92e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.09e-12 | 99 |
multilaminar epithelium | 2.26e-11 | 83 |
integument | 1.55e-09 | 46 |
integumental system | 1.55e-09 | 46 |
somite | 4.28e-09 | 71 |
presomitic mesoderm | 4.28e-09 | 71 |
presumptive segmental plate | 4.28e-09 | 71 |
dermomyotome | 4.28e-09 | 71 |
trunk paraxial mesoderm | 4.28e-09 | 71 |
dense mesenchyme tissue | 5.85e-09 | 73 |
paraxial mesoderm | 9.04e-09 | 72 |
presumptive paraxial mesoderm | 9.04e-09 | 72 |
skin of body | 4.04e-08 | 41 |
skeletal muscle tissue | 1.39e-07 | 62 |
striated muscle tissue | 1.39e-07 | 62 |
myotome | 1.39e-07 | 62 |
epithelial vesicle | 1.97e-07 | 78 |
muscle tissue | 2.26e-07 | 64 |
musculature | 2.26e-07 | 64 |
musculature of body | 2.26e-07 | 64 |
mouth | 7.61e-07 | 29 |
stomodeum | 7.61e-07 | 29 |
subdivision of head | 9.39e-07 | 49 |