FFCP PHASE1:Hg19::chr6:132455433..132455444,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-106bp_to_ENST00000443303_5end | |association_with_transcript=-106bp_to_ENST00000443303_5end | ||
|cluster_id=chr6:132455433..132455444,+ | |||
|coexpression_cluster_id=C2773 | |coexpression_cluster_id=C2773 | ||
|description=CAGE_peak_4_at_ENST00000443303_5end | |description=CAGE_peak_4_at_ENST00000443303_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000306!5.28e-19!4;CL:0002547!5.28e-19!4;CL:0002620!6.18e-14!23;CL:0000197!1.33e-12!6;CL:0000098!1.33e-12!6;CL:0002167!1.33e-12!6;CL:0002139!9.72e-11!24;CL:0000057!5.15e-10!75;CL:0000115!7.47e-09!35;CL:1000413!2.65e-08!9;CL:0005020!3.38e-07!6;CL:0002138!3.38e-07!6;CL:0005022!3.38e-07!6;CL:0002078!9.88e-07!44 | |ontology_enrichment_celltype=CL:1000306!5.28e-19!4;CL:0002547!5.28e-19!4;CL:0002620!6.18e-14!23;CL:0000197!1.33e-12!6;CL:0000098!1.33e-12!6;CL:0002167!1.33e-12!6;CL:0002139!9.72e-11!24;CL:0000057!5.15e-10!75;CL:0000115!7.47e-09!35;CL:1000413!2.65e-08!9;CL:0005020!3.38e-07!6;CL:0002138!3.38e-07!6;CL:0005022!3.38e-07!6;CL:0002078!9.88e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000222;8.10e-41;1!CL:0002545;6.30e-21;2!CL:0000197;6.34e-08;6!CL:0000098;6.34e-08;6!CL:0002167;6.34e-08;6!CL:0002544;7.01e-08;6!CL:0000138;7.01e-08;6 | |ontology_enrichment_celltype_v019=CL:0000222;8.10e-41;1!CL:0002545;6.30e-21;2!CL:0000197;6.34e-08;6!CL:0000098;6.34e-08;6!CL:0002167;6.34e-08;6!CL:0002544;7.01e-08;6!CL:0000138;7.01e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002545,6.96e-21,2;CL:0000197,6.34e-08,6;CL:0000098,6.34e-08,6;CL:0002167,6.34e-08,6;CL:0000058,6.78e-08,6;CL:0000138,6.78e-08,6;CL:0002544,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!8.97e-15!5;DOID:450!8.97e-15!5;DOID:66!8.97e-15!5;DOID:423!8.97e-15!5;DOID:0080000!8.97e-15!5;DOID:11722!8.97e-15!5 | |ontology_enrichment_disease=DOID:17!8.97e-15!5;DOID:450!8.97e-15!5;DOID:66!8.97e-15!5;DOID:423!8.97e-15!5;DOID:0080000!8.97e-15!5;DOID:11722!8.97e-15!5 | ||
|ontology_enrichment_disease_v019=DOID:2513;8.10e-41;1!DOID:3371;2.70e-40;1!DOID:4549;2.70e-40;1!DOID:5861;2.70e-40;1!DOID:6496;2.70e-40;1!DOID:3451;3.44e-21;2!DOID:4159;3.44e-21;2!DOID:0060122;3.44e-21;2!DOID:201;7.01e-08;6!DOID:0060100;7.01e-08;6 | |ontology_enrichment_disease_v019=DOID:2513;8.10e-41;1!DOID:3371;2.70e-40;1!DOID:4549;2.70e-40;1!DOID:5861;2.70e-40;1!DOID:6496;2.70e-40;1!DOID:3451;3.44e-21;2!DOID:4159;3.44e-21;2!DOID:0060122;3.44e-21;2!DOID:201;7.01e-08;6!DOID:0060100;7.01e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,6.62e-41,1;DOID:3371,2.21e-40,1;DOID:4549,2.21e-40,1;DOID:5861,2.21e-40,1;DOID:6496,2.21e-40,1;DOID:3451,3.11e-21,2;DOID:4159,3.11e-21,2;DOID:0060122,3.11e-21,2;DOID:201,6.78e-08,6;DOID:0060100,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000415!5.28e-19!4;UBERON:0007240!5.28e-19!4;UBERON:0005742!5.28e-19!4;UBERON:0005734!5.28e-19!4;UBERON:0004664!5.28e-19!4;UBERON:0004663!5.28e-19!4;UBERON:0000055!1.99e-11!69;UBERON:0002049!4.28e-11!79;UBERON:0007798!4.28e-11!79;UBERON:0000947!5.14e-10!21;UBERON:0010191!5.14e-10!21;UBERON:0002097!3.01e-09!40;UBERON:0001637!5.12e-09!42;UBERON:0003509!5.12e-09!42;UBERON:0004572!5.12e-09!42;UBERON:0001981!1.75e-08!60;UBERON:0007500!1.75e-08!60;UBERON:0004537!1.75e-08!60;UBERON:0006965!1.75e-08!60;UBERON:0003915!2.65e-08!9;UBERON:0004700!2.65e-08!9;UBERON:0001917!2.65e-08!9;UBERON:0004535!4.97e-08!110;UBERON:0002199!5.09e-08!45;UBERON:0002416!5.09e-08!45;UBERON:0001009!1.01e-07!113;UBERON:0010188!9.63e-07!3;UBERON:0002539!9.63e-07!3;UBERON:0008816!9.63e-07!3 | |ontology_enrichment_uberon=UBERON:0000415!5.28e-19!4;UBERON:0007240!5.28e-19!4;UBERON:0005742!5.28e-19!4;UBERON:0005734!5.28e-19!4;UBERON:0004664!5.28e-19!4;UBERON:0004663!5.28e-19!4;UBERON:0000055!1.99e-11!69;UBERON:0002049!4.28e-11!79;UBERON:0007798!4.28e-11!79;UBERON:0000947!5.14e-10!21;UBERON:0010191!5.14e-10!21;UBERON:0002097!3.01e-09!40;UBERON:0001637!5.12e-09!42;UBERON:0003509!5.12e-09!42;UBERON:0004572!5.12e-09!42;UBERON:0001981!1.75e-08!60;UBERON:0007500!1.75e-08!60;UBERON:0004537!1.75e-08!60;UBERON:0006965!1.75e-08!60;UBERON:0003915!2.65e-08!9;UBERON:0004700!2.65e-08!9;UBERON:0001917!2.65e-08!9;UBERON:0004535!4.97e-08!110;UBERON:0002199!5.09e-08!45;UBERON:0002416!5.09e-08!45;UBERON:0001009!1.01e-07!113;UBERON:0010188!9.63e-07!3;UBERON:0002539!9.63e-07!3;UBERON:0008816!9.63e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005800;6.30e-21;2!UBERON:0001515;6.30e-21;2!UBERON:0002418;1.96e-14;3!UBERON:0004755;1.96e-14;3!UBERON:0000014;2.66e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0005800;6.30e-21;2!UBERON:0001515;6.30e-21;2!UBERON:0002418;1.96e-14;3!UBERON:0004755;1.96e-14;3!UBERON:0000014;2.66e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,6.96e-21,2;UBERON:0001515,6.96e-21,2;UBERON:0002418,1.83e-14,3;UBERON:0004755,1.83e-14,3;UBERON:0000014,2.53e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0.22452937262617,0,0,0,0,0,0,0,0,0.506522046658319,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.717558542755448,0.85422955527427,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.473107245101804,4.09994952474496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5753459805015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,1.94163478721301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,10.0947918582921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0.22452937262617,0,0,0,0,0,0,0,0,0.506522046658319,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.717558542755448,0.85422955527427,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.473107245101804,4.09994952474496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5753459805015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,1.94163478721301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,10.0947918582921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ENST00000443303 | |short_description=p4@ENST00000443303 | ||
}} | }} |
Latest revision as of 19:30, 30 July 2015
Short description: | p4@ENST00000443303 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000443303_5end |
Coexpression cluster: | C2773_mesodermal_basal_bone_Multipotent_osteoclastoma_Fibroblast_amniotic |
Association with transcript: | -106bp_to_ENST00000443303_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 6.96e-21 | 2 |
receptor cell | 6.34e-08 | 6 |
sensory epithelial cell | 6.34e-08 | 6 |
olfactory epithelial cell | 6.34e-08 | 6 |
chondroblast | 6.78e-08 | 6 |
chondrocyte | 6.78e-08 | 6 |
aortic endothelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 6.96e-21 | 2 |
thoracic aorta | 6.96e-21 | 2 |
cartilage tissue | 1.83e-14 | 3 |
skeletal tissue | 1.83e-14 | 3 |
zone of skin | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.62e-41 | 1 |
chondrosarcoma | 2.21e-40 | 1 |
extraosseous chondrosarcoma | 2.21e-40 | 1 |
myxoid chondrosarcoma | 2.21e-40 | 1 |
extraskeletal myxoid chondrosarcoma | 2.21e-40 | 1 |
skin carcinoma | 3.11e-21 | 2 |
skin cancer | 3.11e-21 | 2 |
integumentary system cancer | 3.11e-21 | 2 |
connective tissue cancer | 6.78e-08 | 6 |
musculoskeletal system cancer | 6.78e-08 | 6 |