FFCP PHASE1:Hg19::chr17:704185..704233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:704185..704233,+ | |||
|coexpression_cluster_id=C183 | |coexpression_cluster_id=C183 | ||
|description=CAGE_peak_at_chr17:704185..704233,+ | |description=CAGE_peak_at_chr17:704185..704233,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.84e-34;1!CL:0000785;2.58e-34;1!CL:0000819;2.58e-34;1!CL:0002615;2.74e-12;3!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0000307;2.74e-12;3!CL:0000236;2.90e-11;13!CL:0000306;1.50e-09;4!CL:0002222;1.50e-09;4!CL:0002224;1.50e-09;4!CL:0002559;6.78e-08;5 | |ontology_enrichment_celltype_v019=CL:0000817;1.84e-34;1!CL:0000785;2.58e-34;1!CL:0000819;2.58e-34;1!CL:0002615;2.74e-12;3!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0000307;2.74e-12;3!CL:0000236;2.90e-11;13!CL:0000306;1.50e-09;4!CL:0002222;1.50e-09;4!CL:0002224;1.50e-09;4!CL:0002559;6.78e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000817,5.00e-45,3;CL:0000819,2.58e-34,1;CL:0000785,6.48e-18,2;CL:0000955,6.48e-18,2;CL:0000818,6.48e-18,2;CL:0000954,6.48e-18,2;CL:0000816,6.48e-18,2;CL:0000346,2.31e-12,3;CL:1000428,2.31e-12,3;CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0002615,3.24e-12,3;CL:0000236,1.57e-10,14;CL:0000306,1.44e-09,4;CL:0002222,1.44e-09,4;CL:0002224,1.44e-09,4;CL:0002559,6.13e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000954;6.48e-18;2!CL:0000377;2.74e-12;3 | |ontology_enrichment_development_v019=CL:0000954;6.48e-18;2!CL:0000377;2.74e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.58e-34;1!DOID:8675;2.58e-34;1 | |ontology_enrichment_disease_v019=DOID:0060073;2.58e-34;1!DOID:8675;2.58e-34;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.58e-34,1;DOID:8675,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002367!4.98e-11!11;UBERON:0010147!4.98e-11!11;UBERON:0009846!4.98e-11!11;UBERON:0003353!4.98e-11!11;UBERON:0004902!4.98e-11!11;UBERON:0003820!4.98e-11!11;UBERON:0009847!4.98e-11!11;UBERON:0003937!5.07e-10!12;UBERON:0005399!5.07e-10!12;UBERON:0000162!1.94e-08!14;UBERON:0001353!1.94e-08!14;UBERON:0000163!1.94e-08!14;UBERON:0006866!1.94e-08!14;UBERON:0000164!1.94e-08!14;UBERON:0000931!1.94e-08!14;UBERON:0004122!8.32e-08!15 | |ontology_enrichment_uberon=UBERON:0002367!4.98e-11!11;UBERON:0010147!4.98e-11!11;UBERON:0009846!4.98e-11!11;UBERON:0003353!4.98e-11!11;UBERON:0004902!4.98e-11!11;UBERON:0003820!4.98e-11!11;UBERON:0009847!4.98e-11!11;UBERON:0003937!5.07e-10!12;UBERON:0005399!5.07e-10!12;UBERON:0000162!1.94e-08!14;UBERON:0001353!1.94e-08!14;UBERON:0000163!1.94e-08!14;UBERON:0006866!1.94e-08!14;UBERON:0000164!1.94e-08!14;UBERON:0000931!1.94e-08!14;UBERON:0004122!8.32e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0010077;1.50e-09;4!UBERON:0005389;1.50e-09;4!UBERON:0000484;1.50e-09;4!UBERON:0000965;1.50e-09;4!UBERON:0001803;1.50e-09;4!UBERON:0002073;6.78e-08;5!UBERON:0003688;8.72e-07;6!UBERON:0002358;8.72e-07;6!UBERON:0003684;8.72e-07;6!UBERON:0001178;8.72e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0010077;1.50e-09;4!UBERON:0005389;1.50e-09;4!UBERON:0000484;1.50e-09;4!UBERON:0000965;1.50e-09;4!UBERON:0001803;1.50e-09;4!UBERON:0002073;6.78e-08;5!UBERON:0003688;8.72e-07;6!UBERON:0002358;8.72e-07;6!UBERON:0003684;8.72e-07;6!UBERON:0001178;8.72e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.31e-12,3;UBERON:0001992,2.31e-12,3;UBERON:0010077,1.44e-09,4;UBERON:0005389,1.44e-09,4;UBERON:0000484,1.44e-09,4;UBERON:0002546,1.44e-09,4;UBERON:0000965,1.44e-09,4;UBERON:0001803,1.44e-09,4;UBERON:0003073,1.44e-09,4;UBERON:0005426,1.44e-09,4;UBERON:0002073,6.13e-08,5;UBERON:0005086,6.13e-08,5;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08896041751603,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.73682183823499,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08896041751603,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.73682183823499,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:704185..704233,+ | |short_description=p@chr17:704185..704233,+ | ||
}} | }} |
Latest revision as of 20:33, 25 July 2015
Short description: | p@chr17:704185..704233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:704185..704233, + |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 5.00e-45 | 3 |
B-1 B cell | 2.58e-34 | 1 |
mature B cell | 6.48e-18 | 2 |
pre-B-II cell | 6.48e-18 | 2 |
transitional stage B cell | 6.48e-18 | 2 |
small pre-B-II cell | 6.48e-18 | 2 |
immature B cell | 6.48e-18 | 2 |
hair follicle dermal papilla cell | 2.31e-12 | 3 |
stem cell of epidermis | 2.31e-12 | 3 |
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
adipocyte of omentum tissue | 3.24e-12 | 3 |
B cell | 1.57e-10 | 14 |
crystallin accumulating cell | 1.44e-09 | 4 |
vertebrate lens cell | 1.44e-09 | 4 |
lens epithelial cell | 1.44e-09 | 4 |
hair follicle cell | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.31e-12 | 3 |
papillary layer of dermis | 2.31e-12 | 3 |
cuboidal epithelium | 1.44e-09 | 4 |
transparent eye structure | 1.44e-09 | 4 |
simple cuboidal epithelium | 1.44e-09 | 4 |
cranial placode | 1.44e-09 | 4 |
lens of camera-type eye | 1.44e-09 | 4 |
epithelium of lens | 1.44e-09 | 4 |
lens placode | 1.44e-09 | 4 |
lens vesicle | 1.44e-09 | 4 |
hair follicle | 6.13e-08 | 5 |
hair follicle placode | 6.13e-08 | 5 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.58e-34 | 1 |
lymphosarcoma | 2.58e-34 | 1 |