FFCP PHASE1:Hg19::chr1:90308981..90309033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55144 | |EntrezGene=55144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16992 | |HGNC=16992 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL08 | |UniProt=E9PL08 | ||
|association_with_transcript=0bp_to_ENST00000527156_5end | |association_with_transcript=0bp_to_ENST00000527156_5end | ||
|cluster_id=chr1:90308981..90309033,+ | |||
|description=CAGE_peak_2_at_LRRC8D_5end | |description=CAGE_peak_2_at_LRRC8D_5end | ||
|id=chr1:90308981..90309033,+ | |id=chr1:90308981..90309033,+ | ||
|ontology_enrichment_celltype=CL:0000003!8.98e-15!722;CL:0000055!1.23e-10!180;CL:0000076!1.04e-09!62;CL:0000220!8.50e-09!246;CL:0002321!2.90e-08!248;CL:0000222!4.60e-08!119;CL:0000548!8.86e-08!679;CL:0000004!8.86e-08!679;CL:0000255!8.86e-08!679;CL:0000012!1.07e-07!682;CL:0000680!1.32e-07!57;CL:0000056!1.32e-07!57;CL:0000355!1.32e-07!57;CL:0002371!2.02e-07!591;CL:0000144!4.03e-07!625;CL:0000187!7.35e-07!54 | |ontology_enrichment_celltype=CL:0000003!8.98e-15!722;CL:0000055!1.23e-10!180;CL:0000076!1.04e-09!62;CL:0000220!8.50e-09!246;CL:0002321!2.90e-08!248;CL:0000222!4.60e-08!119;CL:0000548!8.86e-08!679;CL:0000004!8.86e-08!679;CL:0000255!8.86e-08!679;CL:0000012!1.07e-07!682;CL:0000680!1.32e-07!57;CL:0000056!1.32e-07!57;CL:0000355!1.32e-07!57;CL:0002371!2.02e-07!591;CL:0000144!4.03e-07!625;CL:0000187!7.35e-07!54 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000076,3.16e-09,63;CL:0002321,2.01e-08,250;CL:0000222,3.51e-08,121;CL:0000680,2.25e-07,58;CL:0000056,2.25e-07,58;CL:0000355,2.25e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.76e-09,99;UBERON:0000486,4.59e-09,83;UBERON:0000490,3.27e-08,148;UBERON:0004535,7.16e-08,109;UBERON:0002329,2.77e-07,71;UBERON:0003059,2.77e-07,71;UBERON:0007282,2.77e-07,71;UBERON:0004290,2.77e-07,71;UBERON:0009618,2.77e-07,71;UBERON:0001009,5.26e-07,112;UBERON:0007524,6.68e-07,73;UBERON:0003077,7.62e-07,72;UBERON:0007285,7.62e-07,72 | |||
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| ||
|short_description=p2@LRRC8D | |short_description=p2@LRRC8D | ||
}} | }} |
Latest revision as of 18:17, 19 September 2015
Short description: | p2@LRRC8D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC8D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527156_5end |
EntrezGene: | LRRC8D |
HGNC: | 16992 |
UniProt: | E9PL08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 3.16e-09 | 63 |
embryonic cell | 2.01e-08 | 250 |
mesodermal cell | 3.51e-08 | 121 |
muscle precursor cell | 2.25e-07 | 58 |
myoblast | 2.25e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.25e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.76e-09 | 99 |
multilaminar epithelium | 4.59e-09 | 83 |
unilaminar epithelium | 3.27e-08 | 148 |
cardiovascular system | 7.16e-08 | 109 |
somite | 2.77e-07 | 71 |
presomitic mesoderm | 2.77e-07 | 71 |
presumptive segmental plate | 2.77e-07 | 71 |
dermomyotome | 2.77e-07 | 71 |
trunk paraxial mesoderm | 2.77e-07 | 71 |
circulatory system | 5.26e-07 | 112 |
dense mesenchyme tissue | 6.68e-07 | 73 |
paraxial mesoderm | 7.62e-07 | 72 |
presumptive paraxial mesoderm | 7.62e-07 | 72 |