FFCP PHASE1:Hg19::chr3:14852043..14852057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14852043..14852057,+ | |||
|description=CAGE_peak_at_chr3:14852043..14852057,+ | |description=CAGE_peak_at_chr3:14852043..14852057,+ | ||
|id=chr3:14852043..14852057,+ | |id=chr3:14852043..14852057,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.52e-22!24;CL:0000115!6.14e-20!35;CL:0000071!1.37e-17!18;CL:0002546!1.37e-17!18;CL:0002078!1.97e-16!44;CL:1000413!2.38e-09!9;CL:0000213!3.31e-09!57;CL:0000215!3.31e-09!57;CL:0002543!2.79e-07!6;CL:0002544!8.29e-07!6;CL:0000990!9.20e-07!8 | |ontology_enrichment_celltype=CL:0002139!1.52e-22!24;CL:0000115!6.14e-20!35;CL:0000071!1.37e-17!18;CL:0002546!1.37e-17!18;CL:0002078!1.97e-16!44;CL:1000413!2.38e-09!9;CL:0000213!3.31e-09!57;CL:0000215!3.31e-09!57;CL:0002543!2.79e-07!6;CL:0002544!8.29e-07!6;CL:0000990!9.20e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.67e-31;24!CL:0000115;1.41e-25;36!CL:0000071;3.14e-24;18!CL:0002078;7.39e-17;45!CL:1000413;1.45e-12;9!CL:0000213;6.70e-11;58!CL:0000215;6.70e-11;58!CL:0002543;1.19e-09;6!CL:0002544;5.32e-09;6!CL:0002138;1.31e-08;6!CL:0000990;8.90e-08;8!CL:0000840;7.81e-07;5 | |ontology_enrichment_celltype_v019=CL:0002139;2.67e-31;24!CL:0000115;1.41e-25;36!CL:0000071;3.14e-24;18!CL:0002078;7.39e-17;45!CL:1000413;1.45e-12;9!CL:0000213;6.70e-11;58!CL:0000215;6.70e-11;58!CL:0002543;1.19e-09;6!CL:0002544;5.32e-09;6!CL:0002138;1.31e-08;6!CL:0000990;8.90e-08;8!CL:0000840;7.81e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.75e-31,24;CL:0000115,2.66e-30,36;CL:0002078,4.41e-25,45;CL:0000071,2.96e-24,18;CL:0002546,2.96e-24,18;CL:0000213,7.26e-17,58;CL:0000215,7.26e-17,58;CL:1000413,1.40e-12,9;CL:0002543,1.16e-09,6;CL:0002544,5.40e-09,6;CL:0005020,1.43e-08,6;CL:0002138,1.43e-08,6;CL:0005022,1.43e-08,6;CL:0000990,8.29e-08,8;CL:0000840,7.71e-07,5;CL:0001029,7.71e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.14e-24;18!CL:0005022;1.31e-08;6!UBERON:0004872;6.46e-07;7 | |ontology_enrichment_development_v019=CL:0002546;3.14e-24;18!CL:0005022;1.31e-08;6!UBERON:0004872;6.46e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.02e-45!115;UBERON:0001986!1.37e-17!18;UBERON:0004638!1.37e-17!18;UBERON:0004852!1.37e-17!18;UBERON:0004111!2.14e-16!241;UBERON:0001049!5.67e-16!57;UBERON:0005068!5.67e-16!57;UBERON:0006241!5.67e-16!57;UBERON:0007135!5.67e-16!57;UBERON:0000025!3.28e-15!194;UBERON:0000477!2.94e-14!286;UBERON:0006914!3.51e-14!25;UBERON:0003080!3.66e-14!42;UBERON:0000487!5.14e-14!22;UBERON:0002780!1.67e-13!41;UBERON:0001890!1.67e-13!41;UBERON:0006240!1.67e-13!41;UBERON:0005743!2.35e-12!86;UBERON:0002616!2.65e-12!59;UBERON:0001017!2.70e-12!82;UBERON:0003075!9.48e-12!86;UBERON:0007284!9.48e-12!86;UBERON:0000955!9.76e-11!69;UBERON:0006238!9.76e-11!69;UBERON:0001893!1.42e-10!34;UBERON:0002346!1.63e-10!90;UBERON:0000073!2.23e-10!94;UBERON:0001016!2.23e-10!94;UBERON:0002020!2.28e-10!34;UBERON:0003528!2.28e-10!34;UBERON:0002791!4.36e-10!33;UBERON:0000468!6.09e-10!659;UBERON:0001869!7.05e-10!32;UBERON:0003915!2.38e-09!9;UBERON:0004700!2.38e-09!9;UBERON:0001917!2.38e-09!9;UBERON:0000467!2.85e-09!625;UBERON:0000480!3.68e-09!626;UBERON:0003056!1.02e-08!61;UBERON:0002619!1.75e-08!22;UBERON:0000922!5.38e-08!612;UBERON:0001950!8.67e-08!20;UBERON:0000956!1.55e-07!25;UBERON:0000203!1.55e-07!25;UBERON:0000483!3.23e-07!309;UBERON:0000119!4.20e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!8.02e-45!115;UBERON:0001986!1.37e-17!18;UBERON:0004638!1.37e-17!18;UBERON:0004852!1.37e-17!18;UBERON:0004111!2.14e-16!241;UBERON:0001049!5.67e-16!57;UBERON:0005068!5.67e-16!57;UBERON:0006241!5.67e-16!57;UBERON:0007135!5.67e-16!57;UBERON:0000025!3.28e-15!194;UBERON:0000477!2.94e-14!286;UBERON:0006914!3.51e-14!25;UBERON:0003080!3.66e-14!42;UBERON:0000487!5.14e-14!22;UBERON:0002780!1.67e-13!41;UBERON:0001890!1.67e-13!41;UBERON:0006240!1.67e-13!41;UBERON:0005743!2.35e-12!86;UBERON:0002616!2.65e-12!59;UBERON:0001017!2.70e-12!82;UBERON:0003075!9.48e-12!86;UBERON:0007284!9.48e-12!86;UBERON:0000955!9.76e-11!69;UBERON:0006238!9.76e-11!69;UBERON:0001893!1.42e-10!34;UBERON:0002346!1.63e-10!90;UBERON:0000073!2.23e-10!94;UBERON:0001016!2.23e-10!94;UBERON:0002020!2.28e-10!34;UBERON:0003528!2.28e-10!34;UBERON:0002791!4.36e-10!33;UBERON:0000468!6.09e-10!659;UBERON:0001869!7.05e-10!32;UBERON:0003915!2.38e-09!9;UBERON:0004700!2.38e-09!9;UBERON:0001917!2.38e-09!9;UBERON:0000467!2.85e-09!625;UBERON:0000480!3.68e-09!626;UBERON:0003056!1.02e-08!61;UBERON:0002619!1.75e-08!22;UBERON:0000922!5.38e-08!612;UBERON:0001950!8.67e-08!20;UBERON:0000956!1.55e-07!25;UBERON:0000203!1.55e-07!25;UBERON:0000483!3.23e-07!309;UBERON:0000119!4.20e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.14e-24;18!UBERON:0001986;3.14e-24;18!UBERON:0004852;3.14e-24;18!UBERON:0006914;4.35e-19;25!UBERON:0000487;1.36e-18;22!UBERON:0003915;1.45e-12;9!UBERON:0004700;1.45e-12;9!UBERON:0001917;1.45e-12;9!UBERON:0000490;1.33e-09;33!UBERON:0007023;4.60e-09;114!UBERON:0001638;9.08e-08;9!UBERON:0003920;9.08e-08;9!UBERON:0004582;9.08e-08;9!UBERON:0002465;2.05e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.14e-24;18!UBERON:0001986;3.14e-24;18!UBERON:0004852;3.14e-24;18!UBERON:0006914;4.35e-19;25!UBERON:0000487;1.36e-18;22!UBERON:0003915;1.45e-12;9!UBERON:0004700;1.45e-12;9!UBERON:0001917;1.45e-12;9!UBERON:0000490;1.33e-09;33!UBERON:0007023;4.60e-09;114!UBERON:0001638;9.08e-08;9!UBERON:0003920;9.08e-08;9!UBERON:0004582;9.08e-08;9!UBERON:0002465;2.05e-07;10 | ||
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|phase1_expression=0,0,0,0,0,0,0,0,1.56711376919903,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,3.52320527201817,0,0,0,0,0,0,0.145398238779565,1.13362783106643,1.21292030593908,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0.722878304769133,0,0.579386075843295,1.5905718941022,1.45990461090791,0.0945348171640679,0,0,6.48346423713678,0,0,17.5255592573529,17.7612332045253,15.4231234201884,0,0,0,15.1059429598696,8.60234595106124,12.4970580578734,15.2633144319483,8.80948816040802,9.62913146790236,7.9418087283988,11.6287541626198,12.0960529313481,10.0416183829401,6.8480983908555,19.7670747486813,7.32186172644509,6.98559852657151,6.48113558305408,9.82297011124877,19.3095260458506,13.625989138482,22.9974956198825,15.1882505530901,16.8545604415975,0,0,0,0,0.12663051166458,0,0,0,0,3.20246987189115,0,0,1.21239604862719,1.79808093424805,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,1.59035721985782,1.16193942869518,1.86589899027667,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,4.20725321410337,0,1.47008711385542,0,0,2.95394953340702,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.70445216541493,7.65142173133691,4.1668696131895,4.37584550139576,0,0,0.984868024349589,7.95614501473408,8.9178697373237,0,0,0,0,0,0.383382679165211,0,0,0.621984346622316,0,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,9.09867072567173,8.84487267437881,9.50030030849413,18.5072703228347,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,3.40035338437484,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,2.53329162357197,2.30506425071931,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0.324621940274555,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,1.99843180798692,0,0,10.1090643697607,0,0,0,0,0,0,0,0.844016498463076,0,0,0.211125408127993,5.77819165928102,4.14425873296722,0,0.20453736500431,0,0,0.0898683511473268,0,0,4.93217028184668,0,0,0.969332746095218,0.834912883456661,0,0,0,5.07499702804355,0,0,2.6002644994473,0,0,0,0.885741385813839,1.08536794762867,0,0.663475559587348,0.295547618953547,1.31631238292384,0,0,5.2326175782582,0,0,0.0897576444097721,0.434589487688032,2.87101043758728,0.0915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,4.59979335417364,4.27721101453538,0,0,0,0.876214728748802,9.63093176758547,0.702793337176017,0,0.19566461893209,0,3.15667522279512,1.20990716048664,0.91821828489147,8.08788219244646,0.150323419414493,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,3.39461557709468,0,2.93774963014692,0,0.397429223405979,1.01297273529406,0,0,9.17847877379216,0.19980960958213,0,1.71804894248874,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,2.55493176133945,0,0,7.54062483435086,7.10397314436219,18.6646986389972,2.1964690054889,1.28767814440971,7.58782955302367,5.97932905131864,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0.643012593860077,0.412618309791701,0.415440338029185,33.7460837327251,12.3808312729272,1.88323625639876,0,2.44297692627514,6.76664186941476,0,0,0,5.00286728461357,4.63464379255802,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,1.32506888912221,0.775697738169303,0.66116300871345,0,0,8.54299300541557,10.2182798314783,9.5274982729855,1.9846640872478,0,0,0.638341257770182,5.44017803369474,6.5179372445902,4.59518365145192,3.93447156851765,0.471162288750703,0.886068179966986,0.854183854313742,1.3771002377715,1.14681839138014,0.998361463831671,1.73869928235874,0.691743174681154,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.389720617678777,4.65026941096771,7.19687734725715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,1.41696576325585,1.59633859057151,0.82046545696302,1.51243017733031,1.72893131160545,0.645902582527404,4.28308260777463,0,0.11796972334774,0,0,0,0.690359926060101,1.79024599904647,3.98614740251063,0,3.90757005616546,0,0,0.295712172434091,2.02612753855184,0,0.413373593002368,1.39514782426595,0.546974809018219,0.548257766857182,9.42801238939659,0,0.127762427639595,4.28561468702629,2.0177023333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| ||
|short_description=p@chr3:14852043..14852057,+ | |short_description=p@chr3:14852043..14852057,+ | ||
}} | }} |
Latest revision as of 16:47, 29 July 2015
Short description: | p@chr3:14852043..14852057, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14852043..14852057, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.75e-31 | 24 |
endothelial cell | 2.66e-30 | 36 |
meso-epithelial cell | 4.41e-25 | 45 |
blood vessel endothelial cell | 2.96e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.96e-24 | 18 |
lining cell | 7.26e-17 | 58 |
barrier cell | 7.26e-17 | 58 |
endothelial cell of artery | 1.40e-12 | 9 |
vein endothelial cell | 1.16e-09 | 6 |
aortic endothelial cell | 5.40e-09 | 6 |
lymphangioblast | 1.43e-08 | 6 |
endothelial cell of lymphatic vessel | 1.43e-08 | 6 |
vascular lymphangioblast | 1.43e-08 | 6 |
conventional dendritic cell | 8.29e-08 | 8 |
immature conventional dendritic cell | 7.71e-07 | 5 |
common dendritic progenitor | 7.71e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.28e-32 | 114 |
blood vessel endothelium | 2.96e-24 | 18 |
endothelium | 2.96e-24 | 18 |
cardiovascular system endothelium | 2.96e-24 | 18 |
squamous epithelium | 4.04e-19 | 25 |
simple squamous epithelium | 1.29e-18 | 22 |
anatomical conduit | 1.61e-14 | 240 |
endothelial tube | 1.40e-12 | 9 |
arterial system endothelium | 1.40e-12 | 9 |
endothelium of artery | 1.40e-12 | 9 |
tube | 6.59e-12 | 192 |
vessel | 8.15e-12 | 68 |
splanchnic layer of lateral plate mesoderm | 1.20e-10 | 83 |
vasculature | 4.52e-09 | 78 |
vascular system | 4.52e-09 | 78 |
circulatory system | 7.26e-09 | 112 |
epithelial tube open at both ends | 1.32e-08 | 59 |
blood vessel | 1.32e-08 | 59 |
blood vasculature | 1.32e-08 | 59 |
vascular cord | 1.32e-08 | 59 |
epithelial tube | 6.04e-08 | 117 |
vein | 9.66e-08 | 9 |
venous blood vessel | 9.66e-08 | 9 |
venous system | 9.66e-08 | 9 |
cardiovascular system | 1.30e-07 | 109 |
lymphoid system | 1.43e-07 | 10 |
compound organ | 2.94e-07 | 68 |