FFCP PHASE1:Hg19::chr14:38064554..38064559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |EntrezGene=3169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |HGNC=5021 | ||
|TSSclassifier=strong | |||
|UniProt=P55317 | |UniProt=P55317 | ||
|association_with_transcript=-65bp_to_NM_004496,uc001wuf.2_5end | |association_with_transcript=-65bp_to_NM_004496,uc001wuf.2_5end | ||
|cluster_id=chr14:38064554..38064559,- | |||
|coexpression_cluster_id=C885 | |coexpression_cluster_id=C885 | ||
|description=CAGE_peak_12_at_FOXA1_5end | |description=CAGE_peak_12_at_FOXA1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.20e-13!254;CL:0000223!2.22e-09!59;CL:0002076!7.67e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.20e-13!254;CL:0000223!2.22e-09!59;CL:0002076!7.67e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002553;5.92e-26;1!CL:0002327;1.31e-07;4!CL:0002563;1.69e-07;4 | |ontology_enrichment_celltype_v019=CL:0002553;5.92e-26;1!CL:0002327;1.31e-07;4!CL:0002563;1.69e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.93e-26,1;CL:0002327,1.31e-07,4;CL:0002563,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.15e-26;1!UBERON:0009847;1.41e-09;3!UBERON:0003353;1.41e-09;3 | |ontology_enrichment_development_v019=UBERON:0008425;2.15e-26;1!UBERON:0009847;1.41e-09;3!UBERON:0003353;1.41e-09;3 | ||
|ontology_enrichment_disease=DOID:305!9.75e-29!106;DOID:0050687!9.31e-21!143;DOID:5093!7.47e-17!4;DOID:1612!7.47e-17!4;DOID:7!1.23e-11!39;DOID:299!8.69e-11!25;DOID:162!2.09e-10!235;DOID:14566!4.98e-10!239;DOID:3493!5.45e-08!2 | |ontology_enrichment_disease=DOID:305!9.75e-29!106;DOID:0050687!9.31e-21!143;DOID:5093!7.47e-17!4;DOID:1612!7.47e-17!4;DOID:7!1.23e-11!39;DOID:299!8.69e-11!25;DOID:162!2.09e-10!235;DOID:14566!4.98e-10!239;DOID:3493!5.45e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.79e-56;4!DOID:1612;3.79e-56;4!DOID:7;5.18e-09;39 | |ontology_enrichment_disease_v019=DOID:5093;3.79e-56;4!DOID:1612;3.79e-56;4!DOID:7;5.18e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,3.80e-56,4;DOID:1612,3.80e-56,4;DOID:7,1.32e-10,39;DOID:305,1.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005911!5.07e-14!82;UBERON:0004921!1.86e-13!129;UBERON:0004185!1.86e-13!129;UBERON:0004119!7.92e-13!169;UBERON:0000925!7.92e-13!169;UBERON:0006595!7.92e-13!169;UBERON:0001007!2.76e-12!155;UBERON:0001555!2.76e-12!155;UBERON:0007026!2.76e-12!155;UBERON:0003929!5.97e-11!54;UBERON:0000077!8.18e-10!130;UBERON:0009569!9.75e-09!113;UBERON:0005153!1.09e-08!37;UBERON:0009497!1.33e-08!25;UBERON:0000015!1.33e-08!25;UBERON:0002423!1.33e-08!25;UBERON:0006235!1.33e-08!25;UBERON:0004161!1.33e-08!25;UBERON:0007499!1.44e-08!25;UBERON:0000341!2.16e-08!2;UBERON:0009856!3.45e-08!26;UBERON:0008835!1.20e-07!22;UBERON:0003894!1.20e-07!22;UBERON:0009854!2.85e-07!23;UBERON:0001041!4.18e-07!98;UBERON:0005157!5.46e-07!51;UBERON:0000310!9.91e-07!10 | |ontology_enrichment_uberon=UBERON:0005911!5.07e-14!82;UBERON:0004921!1.86e-13!129;UBERON:0004185!1.86e-13!129;UBERON:0004119!7.92e-13!169;UBERON:0000925!7.92e-13!169;UBERON:0006595!7.92e-13!169;UBERON:0001007!2.76e-12!155;UBERON:0001555!2.76e-12!155;UBERON:0007026!2.76e-12!155;UBERON:0003929!5.97e-11!54;UBERON:0000077!8.18e-10!130;UBERON:0009569!9.75e-09!113;UBERON:0005153!1.09e-08!37;UBERON:0009497!1.33e-08!25;UBERON:0000015!1.33e-08!25;UBERON:0002423!1.33e-08!25;UBERON:0006235!1.33e-08!25;UBERON:0004161!1.33e-08!25;UBERON:0007499!1.44e-08!25;UBERON:0000341!2.16e-08!2;UBERON:0009856!3.45e-08!26;UBERON:0008835!1.20e-07!22;UBERON:0003894!1.20e-07!22;UBERON:0009854!2.85e-07!23;UBERON:0001041!4.18e-07!98;UBERON:0005157!5.46e-07!51;UBERON:0000310!9.91e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.13e-23;10!UBERON:0001443;5.33e-21;11!UBERON:0000915;2.72e-08;52!UBERON:0001911;1.31e-07;4!UBERON:0001242;1.69e-07;4!UBERON:0001262;1.69e-07;4!UBERON:0004786;1.69e-07;4!UBERON:0004808;1.69e-07;4!UBERON:0001277;1.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000310;5.13e-23;10!UBERON:0001443;5.33e-21;11!UBERON:0000915;2.72e-08;52!UBERON:0001911;1.31e-07;4!UBERON:0001242;1.69e-07;4!UBERON:0001262;1.69e-07;4!UBERON:0004786;1.69e-07;4!UBERON:0004808;1.69e-07;4!UBERON:0001277;1.69e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.13e-23,10;UBERON:0001443,5.33e-21,11;UBERON:0000915,4.46e-08,52;UBERON:0001911,1.31e-07,4;UBERON:0005333,1.31e-07,4;UBERON:0008425,1.31e-07,4;UBERON:0005311,1.31e-07,4;UBERON:0001242,1.49e-07,4;UBERON:0001262,1.49e-07,4;UBERON:0004786,1.49e-07,4;UBERON:0004808,1.49e-07,4;UBERON:0001277,1.49e-07,4 | |||
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| ||
|short_description=p12@FOXA1 | |short_description=p12@FOXA1 | ||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p12@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -65bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.93e-26 | 1 |
mammary gland epithelial cell | 1.31e-07 | 4 |
intestinal epithelial cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 5.13e-23 | 10 |
chest | 5.33e-21 | 11 |
thoracic segment of trunk | 4.46e-08 | 52 |
mammary gland | 1.31e-07 | 4 |
mammary bud | 1.31e-07 | 4 |
mammary ridge | 1.31e-07 | 4 |
mammary placode | 1.31e-07 | 4 |
intestinal mucosa | 1.49e-07 | 4 |
wall of intestine | 1.49e-07 | 4 |
gastrointestinal system mucosa | 1.49e-07 | 4 |
gastrointestinal system epithelium | 1.49e-07 | 4 |
intestinal epithelium | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.80e-56 | 4 |
breast cancer | 3.80e-56 | 4 |
disease of anatomical entity | 1.32e-10 | 39 |
carcinoma | 1.62e-08 | 106 |