FFCP PHASE1:Hg19::chr2:106016774..106016819,-: Difference between revisions
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|id=chr2:106016774..106016819,-
|short_description=p@chr2:106016774..106016819,-
|description=CAGE_peak_at_chr2:106016774..106016819,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:106016774..106016819,- | |||
|description=CAGE_peak_at_chr2:106016774..106016819,- | |||
|id=chr2:106016774..106016819,- | |||
|ontology_enrichment_celltype=CL:0002541!5.99e-20!3;CL:1001319!1.80e-07!1;CL:1000600!1.80e-07!1;CL:0000083!2.25e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.12e-38;3!CL:0000039;2.78e-17;7!CL:0000586;2.78e-17;7!CL:0000083;2.43e-08;4!CL:0000349;5.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.23e-38,3;CL:0000039,2.67e-17,7;CL:0000586,2.67e-17,7;CL:0000083,2.26e-08,4;CL:0000349,5.84e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!9.83e-14!2;DOID:1799!5.58e-08!1;DOID:10165!5.58e-08!1;DOID:1798!5.58e-08!1;DOID:6193!6.37e-08!1;DOID:178!9.44e-08!1;DOID:326!9.44e-08!1;DOID:3978!9.44e-08!1;DOID:3394!9.44e-08!1;DOID:5844!9.44e-08!1;DOID:3111!1.58e-07!1;DOID:3603!1.58e-07!1;DOID:1793!2.25e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.16e-29;1!DOID:10165;3.16e-29;1!DOID:6193;3.16e-29;1!DOID:1798;3.16e-29;1!DOID:3350;2.37e-15;2!DOID:1793;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.37e-29,1;DOID:10165,2.37e-29,1;DOID:1798,2.37e-29,1;DOID:6193,4.20e-29,1;DOID:3350,2.74e-15,2;DOID:1793,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.99e-20!3;UBERON:0000920!5.99e-20!3;UBERON:0005631!7.75e-16!14;UBERON:0000158!7.75e-16!14;UBERON:0003124!1.20e-14!7;UBERON:0001255!9.83e-14!2;UBERON:0001556!9.83e-14!2;UBERON:0004923!2.43e-11!57;UBERON:0000478!5.17e-09!24;UBERON:0002146!7.76e-08!1;UBERON:0005623!7.76e-08!1;UBERON:0004913!8.28e-08!1;UBERON:0003703!8.28e-08!1;UBERON:0001174!8.28e-08!1;UBERON:0004914!8.28e-08!1;UBERON:0004645!1.80e-07!1;UBERON:0001256!1.80e-07!1;UBERON:0001259!1.80e-07!1;UBERON:0002394!3.95e-07!4;UBERON:0003928!3.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.12e-38;3!UBERON:0000920;1.12e-38;3!UBERON:0001255;2.37e-15;2!UBERON:0001556;2.37e-15;2!UBERON:0005631;2.18e-12;10!UBERON:0000158;2.18e-12;10!UBERON:0002075;3.24e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.23e-38,3;UBERON:0003124,3.15e-17,7;UBERON:0001255,2.37e-15,2;UBERON:0001556,2.37e-15,2;UBERON:0005631,4.04e-09,14;UBERON:0000158,4.04e-09,14;UBERON:0002075,3.14e-07,18 | |||
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|short_description=p@chr2:106016774..106016819,- | |||
}} | }} |
Latest revision as of 23:00, 28 July 2015
Short description: | p@chr2:106016774..106016819, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:106016774..106016819, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.23e-38 | 3 |
germ line cell | 2.67e-17 | 7 |
germ cell | 2.67e-17 | 7 |
epithelial cell of pancreas | 2.26e-08 | 4 |
extraembryonic cell | 5.84e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.23e-38 | 3 |
chorion | 3.15e-17 | 7 |
urinary bladder | 2.37e-15 | 2 |
lower urinary tract | 2.37e-15 | 2 |
extraembryonic membrane | 4.04e-09 | 14 |
membranous layer | 4.04e-09 | 14 |
viscus | 3.14e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.37e-29 | 1 |
endocrine pancreas cancer | 2.37e-29 | 1 |
pancreatic endocrine carcinoma | 2.37e-29 | 1 |
epithelioid sarcoma | 4.20e-29 | 1 |
mesenchymal cell neoplasm | 2.74e-15 | 2 |
pancreatic cancer | 2.26e-08 | 4 |