FFCP PHASE1:Hg19::chr2:12857878..12857905,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:12857878..12857905,+
|short_description=p3@TRIB2
|description=CAGE_peak_3_at_TRIB2_5end
|association_with_transcript=-458bp_to_ENST00000405331_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28951 | |EntrezGene=28951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30809 | |HGNC=30809 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCX4 | |UniProt=B5MCX4 | ||
|association_with_transcript=-458bp_to_ENST00000405331_5end | |||
|cluster_id=chr2:12857878..12857905,+ | |||
|coexpression_cluster_id=C4123 | |||
|description=CAGE_peak_3_at_TRIB2_5end | |||
|id=chr2:12857878..12857905,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.17e-12!180;CL:0000133!7.77e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.12e-07,8;CL:0000133,1.15e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.35e-15!94;UBERON:0001016!6.35e-15!94;UBERON:0005743!2.06e-14!86;UBERON:0001017!6.13e-14!82;UBERON:0004121!8.66e-12!169;UBERON:0000924!9.70e-12!173;UBERON:0006601!9.70e-12!173;UBERON:0002616!6.93e-10!59;UBERON:0003075!1.55e-09!86;UBERON:0007284!1.55e-09!86;UBERON:0002346!2.26e-09!90;UBERON:0000955!5.01e-09!69;UBERON:0006238!5.01e-09!69;UBERON:0001049!5.44e-09!57;UBERON:0005068!5.44e-09!57;UBERON:0006241!5.44e-09!57;UBERON:0007135!5.44e-09!57;UBERON:0000153!7.18e-09!129;UBERON:0007811!7.18e-09!129;UBERON:0007023!1.15e-08!115;UBERON:0000033!2.82e-08!123;UBERON:0000475!5.53e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.39e-11,89;UBERON:0001017,5.19e-11,81;UBERON:0004121,3.86e-09,171;UBERON:0000924,3.86e-09,171;UBERON:0006601,3.86e-09,171;UBERON:0011216,3.99e-08,223 | |||
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|phase1_expression=2.18014055124668,0.642301571672949,2.11431606143957,0,0.893922188854576,3.48935409640147,0,1.26343974685366,1.04474251279935,0,0,0.436882744260345,0.263766978228454,3.83675694176145,3.31397375727916,0.672325146451775,2.41077811209591,2.19093027116212,1.95173119516203,8.86471618152873,6.9360235023046,4.70182082217132,2.0036519099174,4.51685602740518,3.51519390865448,0,0,0,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,2.98711155796555,1.60158394814405,1.14950487990897,2.64417949113945,0,0.569212969109448,0.587237189370939,0.764546456250458,1.32171328579026,0,1.05353633910031,0.983548850569165,1.96505381374582,1.23360899399706,1.33749196312542,0.651844533267181,0,1.94826728407911,0.891283655081389,2.65145316727353,2.21533894583621,4.33286182024025,2.0494611156108,0.910415432919148,0.328875809207352,0.276350017785848,1.73881851441031,1.18629250529648,1.07016331235885,1.04535523804977,1.58633079776593,0.383220493601921,4.12352934579156,1.77113784413652,1.27426165729639,1.30216690771284,0,1.05402583354441,1.15187950038977,1.24930726552346,2.13099526839615,0.821127996921047,0.403213486449465,0.534880391567015,0.579297615531196,0,1.34140171940727,3.32442660793179,0,1.00267582127178,0.579386075843295,11.9292892057665,1.45990461090791,2.55244006342983,0.886917589850256,0.790513071238134,1.63723844372141,0,0,1.29818957461873,2.26368658489047,0.664789802594326,0,0,0,0,0,0,0,0.419499436209906,0,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,2.4406205754817,1.10298924103761,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,2.02608818663328,1.98613771219828,2.29469296599051,1.06400514659507,0.560677600142307,0,0,3.11211035399766,1.0776853765575,0.653847612453835,6.65972681637698,8.06646294271999,1.64025002283658,0.936480230490962,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,1.47401180774122,1.03325781175765,3.56400857184616,2.71993622206413,1.82032272387605,0,1.34668891163253,1.37630371859161,0.277064115484183,1.75591048352335,1.5324389789951,2.70428506031874,1.24775401476023,1.07633781413317,2.34913127700424,0.847727604638247,0.300091096084402,0.103052529238439,0.515281080091258,1.11670113798954,1.68776332241266,1.26668106709558,0.252433774244115,0.736399189138395,0.161646056818812,1.06502877754984,0.201504196455281,0.847802961552438,0,0,0,0.365921118388786,1.19276791489337,0.69716365721711,2.28054321033815,0.756962552626885,0.72995471815166,1.56449532329816,1.92972281457866,6.90674606762403,4.17931135228781,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,2.4694440679884,1.47008711385542,0,0,2.36315962672562,0,0.122988438543114,0.686271241194102,0,0,0,0,0.325808305310325,1.03993478527958,0,4.28942498407784,0.70445216541493,0.433099343283221,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,5.41929561685538,8.4526496652697,3.52457796419313,9.07955706526857,2.5248486685276,4.31785681186749,11.4596527667483,19.926966025708,6.84289784090821,2.26220483947312,4.80548892550268,22.2944617451851,4.59737445815979,2.61576041299968,3.0802080044799,0.258543431515556,10.7296933755565,0,1.06375246633948,0,1.54324424557285,2.83698264046557,0.799266537048298,3.86040582876998,0.542621605391443,0,0.65147236858747,2.48774364119782,0.791951872933429,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,1.91699884393266,2.29723871668228,0,0.579125226670317,0.821905290201534,0.537182889719687,0.896681151948218,0,0.862510299438069,0.385029108839245,60.7286151891688,23.4251736943719,10.05275456611,12.8987524307449,11.4828975297569,0,0,0,4.41689370188904,12.0040925054323,2.44138521329762,1.24782516918484,0.535286966391485,0.157702415033935,1.40569697991256,2.70851489754947,6.82222512167955,2.0694614258501,1.32845119707087,1.47495334833363,0.173767228936166,14.0976833373173,10.6374461381365,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0.248107807818777,1.84154367945675,0.561320188866147,1.15325234330131,1.02341449813341,1.28683136914886,2.96836132889982,2.62156479464514,3.55123450626254,1.23190734020714,0,0.929683027679674,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0.769350375349168,0.656029291399411,1.30151357865721,0.721287081534056,0.27470839445503,0.247528499761764,0,0.650060246036521,1.6068392984416,2.41676795730305,0.462145851343933,0.307007349452259,1.10269257987624,0.859361958946189,1.74020032697074,0.852266274161009,3.11612124763581,0,0,0,0,0.464845549297286,3.1481234683064,1.3940745403212,1.54016790088044,1.59691809095107,4.34966496037536,0.74129687641568,2.28999818787186,3.72158369359667,0.949138274156178,1.33441135746677,0.511795582622668,2.99557291623744,1.9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| ||
|short_description=p3@TRIB2 | |||
}} | }} |
Latest revision as of 21:34, 16 September 2015
Short description: | p3@TRIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIB2_5end |
Coexpression cluster: | C4123_Neural_Melanocyte_Neurons_epithelioid_Wilms_Pericytes_leiomyoblastoma |
Association with transcript: | -458bp_to_ENST00000405331_5end |
EntrezGene: | TRIB2 |
HGNC: | 30809 |
UniProt: | B5MCX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.12e-07 | 8 |
neurectodermal cell | 1.15e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.39e-11 | 89 |
central nervous system | 5.19e-11 | 81 |
ectoderm-derived structure | 3.86e-09 | 171 |
ectoderm | 3.86e-09 | 171 |
presumptive ectoderm | 3.86e-09 | 171 |
organ system subdivision | 3.99e-08 | 223 |