FFCP PHASE1:Mm9::chr4:132612085..132612097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |MCL_coexpression_id=105 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:132612085..132612097,- | |||
|description=CAGE_peak_at_chr4:132612085..132612097,- | |description=CAGE_peak_at_chr4:132612085..132612097,- | ||
|id=chr4:132612085..132612097,- | |id=chr4:132612085..132612097,- | ||
|ontology_enrichment_celltype=CL:0002563!1.04e-09!9;CL:0002251!1.04e-09!9 | |ontology_enrichment_celltype=CL:0002563!1.04e-09!9;CL:0002251!1.04e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.67e-34,3;CL:0002563,3.75e-20,9;CL:0002251,3.75e-20,9;CL:0000764,2.04e-15,3;CL:0000765,2.04e-15,3;CL:0000038,2.04e-15,3;CL:0000547,2.04e-15,3;CL:0000223,4.51e-14,20;CL:0002076,2.74e-12,15;CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1;CL:0000066,2.63e-11,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.04e-15,3;DOID:0060083,2.04e-15,3;DOID:1240,2.04e-15,3;DOID:0050686,3.41e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003350!1.04e-09!9;UBERON:0004808!1.04e-09!9;UBERON:0001277!1.04e-09!9;UBERON:0001242!3.12e-09!13;UBERON:0000060!3.12e-09!13;UBERON:0001262!3.12e-09!13;UBERON:0004786!3.12e-09!13;UBERON:0000344!1.29e-07!15;UBERON:0000485!1.54e-07!11 | |ontology_enrichment_uberon=UBERON:0003350!1.04e-09!9;UBERON:0004808!1.04e-09!9;UBERON:0001277!1.04e-09!9;UBERON:0001242!3.12e-09!13;UBERON:0000060!3.12e-09!13;UBERON:0001262!3.12e-09!13;UBERON:0004786!3.12e-09!13;UBERON:0000344!1.29e-07!15;UBERON:0000485!1.54e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.75e-20,9;UBERON:0004808,3.75e-20,9;UBERON:0001277,3.75e-20,9;UBERON:0000485,1.39e-16,11;UBERON:0001242,4.15e-14,13;UBERON:0001262,4.15e-14,13;UBERON:0004786,4.15e-14,13;UBERON:0000344,2.74e-12,15;UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1;UBERON:0004923,7.98e-08,24 | |||
|phase1_expression=0,0.697950815278722,0,0.30246421130683,0.500895729946347,0.839396359559449,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0.261199789138935,0,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,3.81018404075779,1.23012957516914,0,12.7094712690561,3.82339684324532,12.0459920194798,0,0.7813353445238,0,1.17646297606203,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.448569283047378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0.697950815278722,0,0.30246421130683,0.500895729946347,0.839396359559449,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0.261199789138935,0,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,3.81018404075779,1.23012957516914,0,12.7094712690561,3.82339684324532,12.0459920194798,0,0.7813353445238,0,1.17646297606203,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.448569283047378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr4:132612085..132612097,- | |short_description=p@chr4:132612085..132612097,- | ||
}} | }} |
Latest revision as of 21:24, 4 August 2015
Short description: | p@chr4:132612085..132612097, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:132612085..132612097, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.67e-34 | 3 |
intestinal epithelial cell | 3.75e-20 | 9 |
epithelial cell of alimentary canal | 3.75e-20 | 9 |
erythroid lineage cell | 2.04e-15 | 3 |
erythroblast | 2.04e-15 | 3 |
erythroid progenitor cell | 2.04e-15 | 3 |
proerythroblast | 2.04e-15 | 3 |
endodermal cell | 4.51e-14 | 20 |
endo-epithelial cell | 2.74e-12 | 15 |
lining cell | 3.34e-12 | 1 |
meso-epithelial cell | 3.34e-12 | 1 |
endothelial cell | 3.34e-12 | 1 |
endothelial cell of sinusoid | 3.34e-12 | 1 |
endothelial cell of hepatic sinusoid | 3.34e-12 | 1 |
epithelial cell | 2.63e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.75e-20 | 9 |
gastrointestinal system epithelium | 3.75e-20 | 9 |
intestinal epithelium | 3.75e-20 | 9 |
simple columnar epithelium | 1.39e-16 | 11 |
intestinal mucosa | 4.15e-14 | 13 |
wall of intestine | 4.15e-14 | 13 |
gastrointestinal system mucosa | 4.15e-14 | 13 |
mucosa | 2.74e-12 | 15 |
bile duct | 3.34e-12 | 1 |
hepatic sinusoid | 3.34e-12 | 1 |
parenchyma | 3.34e-12 | 1 |
abdomen blood vessel | 3.34e-12 | 1 |
sinusoid | 3.34e-12 | 1 |
digestive system duct | 3.34e-12 | 1 |
abdominal segment blood vessel | 3.34e-12 | 1 |
trunk blood vessel | 3.34e-12 | 1 |
liver parenchyma | 3.34e-12 | 1 |
liver lobule | 3.34e-12 | 1 |
biliary system | 3.34e-12 | 1 |
biliary tree | 3.34e-12 | 1 |
biliary bud | 3.34e-12 | 1 |
hepatic duct | 3.34e-12 | 1 |
organ component layer | 7.98e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.04e-15 | 3 |
immune system cancer | 2.04e-15 | 3 |
leukemia | 2.04e-15 | 3 |
organ system cancer | 3.41e-08 | 6 |