FFCP PHASE1:Hg19::chr2:173940557..173940625,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:173940557..173940625,+
|short_description=p1@ZAK
|description=CAGE_peak_1_at_ZAK_5end
|association_with_transcript=0bp_to_ENST00000338983,ENST00000431503,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51776 | |EntrezGene=51776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ47,Q9NYL2,D4Q8H0 | |UniProt=B4DQ47,Q9NYL2,D4Q8H0 | ||
|association_with_transcript=0bp_to_ENST00000338983,ENST00000431503,ENST00000468408,ENST00000476618,NM_016653,NM_133646,uc002uhx.2,uc002uhy.2,uc002uhz.2,uc010zei.1_5end | |||
|cluster_id=chr2:173940557..173940625,+ | |||
|coexpression_cluster_id=C2671 | |||
|description=CAGE_peak_1_at_ZAK_5end | |||
|id=chr2:173940557..173940625,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.14e-21!42;CL:0000860!2.61e-20!45;CL:0002009!1.70e-15!65;CL:0002194!9.78e-15!63;CL:0000576!9.78e-15!63;CL:0000040!9.78e-15!63;CL:0000559!9.78e-15!63;CL:0000557!2.35e-12!71;CL:0000839!5.56e-12!70;CL:0000763!2.74e-09!112;CL:0000049!2.74e-09!112;CL:0000766!7.68e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-18;33!CL:0002057;1.22e-18;33!CL:0000473;2.95e-13;39!CL:0000234;2.95e-13;39!CL:0000576;9.90e-12;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.14e-21,42;CL:0002057,3.14e-21,42;CL:0000473,1.87e-18,48;CL:0000234,1.87e-18,48;CL:0002009,3.75e-16,61;CL:0002194,2.23e-15,59;CL:0000576,2.23e-15,59;CL:0000040,2.23e-15,59;CL:0000559,2.23e-15,59;CL:0000557,8.58e-13,67;CL:0000839,2.08e-12,66;CL:0000763,1.88e-09,108;CL:0000049,1.88e-09,108;CL:0000766,4.24e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.67e-13!101;UBERON:0001434!1.67e-13!101;UBERON:0001474!2.34e-11!86;UBERON:0002371!2.80e-11!80;UBERON:0000062!6.88e-11!511;UBERON:0002204!8.67e-11!167;UBERON:0003102!3.28e-10!95;UBERON:0000926!1.21e-09!448;UBERON:0004120!1.21e-09!448;UBERON:0006603!1.21e-09!448;UBERON:0000468!4.12e-08!659;UBERON:0001007!4.79e-07!155;UBERON:0001555!4.79e-07!155;UBERON:0007026!4.79e-07!155;UBERON:0002390!5.64e-07!102;UBERON:0003061!5.64e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.13e-14,100;UBERON:0004765,5.09e-13,90;UBERON:0001474,1.18e-11,82;UBERON:0002371,1.31e-11,76;UBERON:0002204,1.38e-11,167;UBERON:0003102,7.84e-11,99;UBERON:0001007,2.71e-07,145;UBERON:0001555,2.71e-07,145;UBERON:0007026,2.71e-07,145;UBERON:0002390,4.38e-07,98;UBERON:0003061,4.38e-07,98 | |||
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| ||
|short_description=p1@ZAK | |||
}} | }} |
Latest revision as of 06:08, 18 September 2015
Short description: | p1@ZAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZAK_5end |
Coexpression cluster: | C2671_skeletal_smooth_heart_CD14_left_bladder_mature |
Association with transcript: | 0bp_to_ENST00000338983, ENST00000431503, ENST00000468408, ENST00000476618, NM_016653, NM_133646, uc002uhx.2, uc002uhy.2, uc002uhz.2, uc010zei.1_5end |
EntrezGene: | ZAK |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.14e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-21 | 42 |
defensive cell | 1.87e-18 | 48 |
phagocyte | 1.87e-18 | 48 |
macrophage dendritic cell progenitor | 3.75e-16 | 61 |
monopoietic cell | 2.23e-15 | 59 |
monocyte | 2.23e-15 | 59 |
monoblast | 2.23e-15 | 59 |
promonocyte | 2.23e-15 | 59 |
granulocyte monocyte progenitor cell | 8.58e-13 | 67 |
myeloid lineage restricted progenitor cell | 2.08e-12 | 66 |
myeloid cell | 1.88e-09 | 108 |
common myeloid progenitor | 1.88e-09 | 108 |
myeloid leukocyte | 4.24e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.13e-14 | 100 |
skeletal element | 5.09e-13 | 90 |
bone element | 1.18e-11 | 82 |
bone marrow | 1.31e-11 | 76 |
musculoskeletal system | 1.38e-11 | 167 |
surface structure | 7.84e-11 | 99 |
digestive system | 2.71e-07 | 145 |
digestive tract | 2.71e-07 | 145 |
primitive gut | 2.71e-07 | 145 |
hematopoietic system | 4.38e-07 | 98 |
blood island | 4.38e-07 | 98 |