FFCP PHASE1:Mm9::chr18:36576247..36576252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |MCL_coexpression_id=232 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:36576247..36576252,- | |||
|description=CAGE_peak_at_chr18:36576247..36576252,- | |description=CAGE_peak_at_chr18:36576247..36576252,- | ||
|id=chr18:36576247..36576252,- | |id=chr18:36576247..36576252,- | ||
|ontology_enrichment_celltype=CL:0000066!9.08e-27!25;CL:0002563!2.44e-23!9;CL:0002251!2.44e-23!9;CL:0002076!1.05e-19!15;CL:0000075!1.43e-17!7;CL:0000223!4.63e-17!20;CL:0000239!6.49e-16!6;CL:0000677!6.49e-16!6;CL:0000212!6.49e-16!6;CL:0000584!6.49e-16!6;CL:0002250!5.37e-09!3;CL:0000473!1.52e-08!3;CL:0000627!1.52e-08!3;CL:0000682!1.52e-08!3;CL:0000063!1.38e-07!66 | |ontology_enrichment_celltype=CL:0000066!9.08e-27!25;CL:0002563!2.44e-23!9;CL:0002251!2.44e-23!9;CL:0002076!1.05e-19!15;CL:0000075!1.43e-17!7;CL:0000223!4.63e-17!20;CL:0000239!6.49e-16!6;CL:0000677!6.49e-16!6;CL:0000212!6.49e-16!6;CL:0000584!6.49e-16!6;CL:0002250!5.37e-09!3;CL:0000473!1.52e-08!3;CL:0000627!1.52e-08!3;CL:0000682!1.52e-08!3;CL:0000063!1.38e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.19e-56,9;CL:0002251,2.19e-56,9;CL:0000066,4.76e-48,25;CL:0002076,4.00e-41,15;CL:0000239,1.33e-37,6;CL:0000677,1.33e-37,6;CL:0000584,1.33e-37,6;CL:0000223,2.86e-37,20;CL:0000075,3.22e-32,7;CL:0002250,3.45e-20,3;CL:0000682,4.72e-19,3;CL:0002321,8.23e-10,70;CL:0000473,1.66e-08,7;CL:0000213,6.29e-08,1;CL:0002078,6.29e-08,1;CL:0000115,6.29e-08,1;CL:0002262,6.29e-08,1;CL:1000398,6.29e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!4.47e-27!11;UBERON:0001242!6.76e-27!13;UBERON:0000060!6.76e-27!13;UBERON:0001262!6.76e-27!13;UBERON:0004786!6.76e-27!13;UBERON:0003350!2.44e-23!9;UBERON:0004808!2.44e-23!9;UBERON:0001277!2.44e-23!9;UBERON:0000344!6.19e-23!15;UBERON:0004923!2.74e-13!24;UBERON:0000160!1.43e-11!43;UBERON:0005409!1.22e-09!59 | |ontology_enrichment_uberon=UBERON:0000485!4.47e-27!11;UBERON:0001242!6.76e-27!13;UBERON:0000060!6.76e-27!13;UBERON:0001262!6.76e-27!13;UBERON:0004786!6.76e-27!13;UBERON:0003350!2.44e-23!9;UBERON:0004808!2.44e-23!9;UBERON:0001277!2.44e-23!9;UBERON:0000344!6.19e-23!15;UBERON:0004923!2.74e-13!24;UBERON:0000160!1.43e-11!43;UBERON:0005409!1.22e-09!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.19e-56,9;UBERON:0004808,2.19e-56,9;UBERON:0001277,2.19e-56,9;UBERON:0000485,5.14e-46,11;UBERON:0001242,7.90e-39,13;UBERON:0001262,7.90e-39,13;UBERON:0004786,7.90e-39,13;UBERON:0000344,1.49e-33,15;UBERON:0004923,1.13e-20,24;UBERON:0000160,8.30e-16,31;UBERON:0003929,1.35e-10,55;UBERON:0005409,4.19e-10,47;UBERON:0000490,1.24e-08,66;UBERON:0005911,3.31e-08,69;UBERON:0002394,6.29e-08,1;UBERON:0001281,6.29e-08,1;UBERON:0000353,6.29e-08,1;UBERON:0003497,6.29e-08,1;UBERON:0003909,6.29e-08,1;UBERON:0003928,6.29e-08,1;UBERON:0003835,6.29e-08,1;UBERON:0003513,6.29e-08,1;UBERON:0001280,6.29e-08,1;UBERON:0004647,6.29e-08,1;UBERON:0002294,6.29e-08,1;UBERON:0001173,6.29e-08,1;UBERON:0004912,6.29e-08,1;UBERON:0005171,6.29e-08,1 | |||
|phase1_expression=0.320297694209588,4.88565570695105,6.3699893514535,4.53696316960245,5.00895729946347,3.86122325397347,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8711598205751,4.30761996159075,2.58565479223067,0,0.252030129759931,0.221730510655305,0,0,0,9.53210345179206,3.65716219788683,10.2084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11620568364698,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.29894624606728,0.760079596425296,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,4.88565570695105,6.3699893514535,4.53696316960245,5.00895729946347,3.86122325397347,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8711598205751,4.30761996159075,2.58565479223067,0,0.252030129759931,0.221730510655305,0,0,0,9.53210345179206,3.65716219788683,10.2084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11620568364698,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.29894624606728,0.760079596425296,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:36576247..36576252,- | |short_description=p@chr18:36576247..36576252,- | ||
}} | }} |
Latest revision as of 17:20, 5 August 2015
Short description: | p@chr18:36576247..36576252, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:36576247..36576252, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.19e-56 | 9 |
epithelial cell of alimentary canal | 2.19e-56 | 9 |
epithelial cell | 4.76e-48 | 25 |
endo-epithelial cell | 4.00e-41 | 15 |
brush border epithelial cell | 1.33e-37 | 6 |
gut absorptive cell | 1.33e-37 | 6 |
enterocyte | 1.33e-37 | 6 |
endodermal cell | 2.86e-37 | 20 |
columnar/cuboidal epithelial cell | 3.22e-32 | 7 |
intestinal crypt stem cell | 3.45e-20 | 3 |
M cell of gut | 4.72e-19 | 3 |
embryonic cell | 8.23e-10 | 70 |
defensive cell | 1.66e-08 | 7 |
lining cell | 6.29e-08 | 1 |
meso-epithelial cell | 6.29e-08 | 1 |
endothelial cell | 6.29e-08 | 1 |
endothelial cell of sinusoid | 6.29e-08 | 1 |
endothelial cell of hepatic sinusoid | 6.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.19e-56 | 9 |
gastrointestinal system epithelium | 2.19e-56 | 9 |
intestinal epithelium | 2.19e-56 | 9 |
simple columnar epithelium | 5.14e-46 | 11 |
intestinal mucosa | 7.90e-39 | 13 |
wall of intestine | 7.90e-39 | 13 |
gastrointestinal system mucosa | 7.90e-39 | 13 |
mucosa | 1.49e-33 | 15 |
organ component layer | 1.13e-20 | 24 |
intestine | 8.30e-16 | 31 |
gut epithelium | 1.35e-10 | 55 |
gastrointestinal system | 4.19e-10 | 47 |
unilaminar epithelium | 1.24e-08 | 66 |
endo-epithelium | 3.31e-08 | 69 |
bile duct | 6.29e-08 | 1 |
hepatic sinusoid | 6.29e-08 | 1 |
parenchyma | 6.29e-08 | 1 |
abdomen blood vessel | 6.29e-08 | 1 |
sinusoid | 6.29e-08 | 1 |
digestive system duct | 6.29e-08 | 1 |
abdominal segment blood vessel | 6.29e-08 | 1 |
trunk blood vessel | 6.29e-08 | 1 |
liver parenchyma | 6.29e-08 | 1 |
liver lobule | 6.29e-08 | 1 |
biliary system | 6.29e-08 | 1 |
biliary tree | 6.29e-08 | 1 |
biliary bud | 6.29e-08 | 1 |
hepatic duct | 6.29e-08 | 1 |