FFCP PHASE1:Hg19::chr2:189654840..189654855,-: Difference between revisions
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|id=chr2:189654840..189654855,-
|short_description=p1@DIRC1
|description=CAGE_peak_1_at_DIRC1_5end
|association_with_transcript=-9bp_to_ENST00000308100,NM_052952,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116093 | |EntrezGene=116093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15760 | |HGNC=15760 | ||
|TSSclassifier=strong | |||
|UniProt=Q969H9 | |UniProt=Q969H9 | ||
|association_with_transcript=-9bp_to_ENST00000308100,NM_052952,uc002uqi.1_5end | |||
|cluster_id=chr2:189654840..189654855,- | |||
|coexpression_cluster_id=C2124 | |||
|description=CAGE_peak_1_at_DIRC1_5end | |||
|id=chr2:189654840..189654855,- | |||
|ontology_enrichment_celltype=CL:0000680!6.16e-16!57;CL:0000056!6.16e-16!57;CL:0000355!6.16e-16!57;CL:0000188!1.98e-13!9;CL:0000187!5.78e-13!54;CL:0000055!7.14e-13!180;CL:0000048!1.03e-12!430;CL:0002570!2.04e-12!8;CL:0000723!3.07e-12!436;CL:0000034!1.25e-11!444;CL:0000183!2.52e-11!59;CL:0000393!4.96e-11!60;CL:0000211!4.96e-11!60;CL:0000569!8.85e-08!4;CL:0000011!8.85e-08!4;CL:0000136!3.91e-07!15;CL:0000594!4.32e-07!3;CL:0000057!8.36e-07!75;CL:0000192!9.73e-07!42;CL:0000514!9.73e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002561;2.12e-15;2!CL:0002570;2.02e-14;8!CL:0000188;9.61e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.91e-15,2;CL:0002570,2.06e-14,8;CL:0000187,7.36e-09,55;CL:0000680,2.50e-08,58;CL:0000056,2.50e-08,58;CL:0000355,2.50e-08,58;CL:0000393,7.50e-08,61;CL:0000211,7.50e-08,61;CL:0000188,9.73e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000355;1.22e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!8.73e-10!14;DOID:0060084!6.18e-07!3;DOID:127!6.18e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.53e-10;3!DOID:127;2.53e-10;3!DOID:0060072;5.93e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.12e-10,3;DOID:127,3.12e-10,3;DOID:0060072,6.94e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.12e-14!61;UBERON:0002036!2.12e-14!61;UBERON:0003082!2.12e-14!61;UBERON:0002385!1.04e-13!63;UBERON:0001015!1.04e-13!63;UBERON:0000383!1.04e-13!63;UBERON:0004290!1.21e-12!70;UBERON:0000914!2.76e-12!83;UBERON:0002329!2.76e-12!83;UBERON:0003077!2.76e-12!83;UBERON:0003059!2.76e-12!83;UBERON:0007282!2.76e-12!83;UBERON:0009618!2.76e-12!83;UBERON:0007285!2.76e-12!83;UBERON:0000486!1.15e-10!82;UBERON:0001013!1.89e-10!14;UBERON:0002119!3.29e-08!4;UBERON:0004531!3.29e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.12e-15;2!UBERON:0005942;2.12e-15;2!UBERON:0005932;2.12e-15;2!UBERON:0001013;2.06e-12;14!UBERON:0007029;4.10e-08;1!UBERON:0002119;6.47e-08;4!UBERON:0002385;5.52e-07;31!UBERON:0001015;5.52e-07;31!UBERON:0000383;5.52e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.91e-15,2;UBERON:0005942,1.91e-15,2;UBERON:0005932,1.91e-15,2;UBERON:0001013,2.00e-12,14;UBERON:0007029,2.89e-08,1;UBERON:0002119,5.84e-08,4;UBERON:0001134,1.06e-07,62;UBERON:0002036,1.06e-07,62;UBERON:0003082,1.06e-07,62;UBERON:0002385,2.03e-07,64;UBERON:0001015,2.03e-07,64;UBERON:0000383,2.03e-07,64;UBERON:0004573,4.88e-07,33;UBERON:0004571,4.88e-07,33 | |||
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| ||
|short_description=p1@DIRC1 | |||
}} | }} |
Latest revision as of 01:00, 19 September 2015
Short description: | p1@DIRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DIRC1_5end |
Coexpression cluster: | C2124_mesenchymal_tenocyte_Skeletal_Smooth_leiomyoma_Hair_Preadipocyte |
Association with transcript: | -9bp_to_ENST00000308100, NM_052952, uc002uqi.1_5end |
EntrezGene: | DIRC1 |
HGNC: | 15760 |
UniProt: | Q969H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.91e-15 | 2 |
mesenchymal stem cell of adipose | 2.06e-14 | 8 |
muscle cell | 7.36e-09 | 55 |
muscle precursor cell | 2.50e-08 | 58 |
myoblast | 2.50e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.50e-08 | 58 |
electrically responsive cell | 7.50e-08 | 61 |
electrically active cell | 7.50e-08 | 61 |
cell of skeletal muscle | 9.73e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.91e-15 | 2 |
hair outer root sheath | 1.91e-15 | 2 |
bulb of hair follicle | 1.91e-15 | 2 |
adipose tissue | 2.00e-12 | 14 |
surface | 2.89e-08 | 1 |
left ovary | 5.84e-08 | 4 |
skeletal muscle tissue | 1.06e-07 | 62 |
striated muscle tissue | 1.06e-07 | 62 |
myotome | 1.06e-07 | 62 |
muscle tissue | 2.03e-07 | 64 |
musculature | 2.03e-07 | 64 |
musculature of body | 2.03e-07 | 64 |
systemic artery | 4.88e-07 | 33 |
systemic arterial system | 4.88e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.12e-10 | 3 |
leiomyoma | 3.12e-10 | 3 |
benign neoplasm | 6.94e-08 | 4 |