FFCP PHASE1:Hg19::chr2:220285599..220285647,+: Difference between revisions
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|id=chr2:220285599..220285647,+
|short_description=p@chr2:220285599..220285647,+
|description=CAGE_peak_at_chr2:220285599..220285647,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:220285599..220285647,+ | |||
|coexpression_cluster_id=C305 | |||
|description=CAGE_peak_at_chr2:220285599..220285647,+ | |||
|id=chr2:220285599..220285647,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.35e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.13e-13;65!UBERON:0005062;2.20e-09;4!UBERON:0007284;2.20e-09;4!UBERON:0007297;3.40e-09;2!UBERON:0003104;6.24e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.36e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-25!115;UBERON:0000481!1.15e-07!347;UBERON:0004151!1.44e-07!3;UBERON:0006947!1.47e-07!3;UBERON:0004054!1.47e-07!3;UBERON:0003978!2.30e-07!3;UBERON:0009751!2.30e-07!3;UBERON:0000946!2.30e-07!3;UBERON:0002523!2.30e-07!3;UBERON:0005983!2.30e-07!3;UBERON:0002165!2.30e-07!3;UBERON:0002062!2.30e-07!3;UBERON:0007280!2.30e-07!3;UBERON:0002385!8.21e-07!63;UBERON:0001015!8.21e-07!63;UBERON:0000383!8.21e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.39e-14;16!UBERON:0002036;1.39e-14;16!UBERON:0004151;9.71e-13;3!UBERON:0006947;1.09e-12;3!UBERON:0004054;1.09e-12;3!UBERON:0003978;2.31e-12;3!UBERON:0000946;2.31e-12;3!UBERON:0007100;1.47e-11;25!UBERON:0002385;1.36e-10;31!UBERON:0001015;1.36e-10;31!UBERON:0000383;1.36e-10;31!UBERON:0005904;1.26e-09;4!UBERON:0005090;1.53e-09;2!UBERON:0001630;1.53e-09;2!UBERON:0000160;1.86e-09;17!UBERON:0000341;4.42e-09;2!UBERON:0002081;8.85e-09;2!UBERON:0002133;1.14e-08;2!UBERON:0000059;1.32e-08;11!UBERON:0004175;5.02e-08;21!UBERON:0005409;3.37e-07;22!UBERON:0001155;3.86e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.61e-22,114;UBERON:0004151,9.53e-13,3;UBERON:0006947,9.91e-13,3;UBERON:0004054,9.91e-13,3;UBERON:0003978,2.27e-12,3;UBERON:0009751,2.27e-12,3;UBERON:0000946,2.27e-12,3;UBERON:0002523,2.27e-12,3;UBERON:0005983,2.27e-12,3;UBERON:0002165,2.27e-12,3;UBERON:0002062,2.27e-12,3;UBERON:0007280,2.27e-12,3;UBERON:0007100,1.33e-10,27;UBERON:0005904,1.17e-09,4;UBERON:0000160,1.40e-09,17;UBERON:0005090,1.54e-09,2;UBERON:0001630,1.54e-09,2;UBERON:0000341,4.42e-09,2;UBERON:0002081,8.69e-09,2;UBERON:0010227,8.69e-09,2;UBERON:0002133,1.14e-08,2;UBERON:0000059,1.15e-08,11;UBERON:0003103,1.51e-08,68;UBERON:0001155,3.80e-07,9 | |||
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| ||
|short_description=p@chr2:220285599..220285647,+ | |||
}} | }} |
Latest revision as of 06:54, 29 July 2015
Short description: | p@chr2:220285599..220285647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220285599..220285647, + |
Coexpression cluster: | C305_heart_skeletal_smooth_left_bladder_penis_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.61e-22 | 114 |
cardiac chamber | 9.53e-13 | 3 |
male genital duct | 9.91e-13 | 3 |
internal male genitalia | 9.91e-13 | 3 |
valve | 2.27e-12 | 3 |
cardiac mesenchyme | 2.27e-12 | 3 |
cardial valve | 2.27e-12 | 3 |
tunica intima | 2.27e-12 | 3 |
heart layer | 2.27e-12 | 3 |
endocardium | 2.27e-12 | 3 |
endocardial cushion | 2.27e-12 | 3 |
presumptive endocardium | 2.27e-12 | 3 |
primary circulatory organ | 1.33e-10 | 27 |
duct of male reproductive system | 1.17e-09 | 4 |
intestine | 1.40e-09 | 17 |
muscle structure | 1.54e-09 | 2 |
muscle organ | 1.54e-09 | 2 |
throat | 4.42e-09 | 2 |
cardiac atrium | 8.69e-09 | 2 |
future cardiac atrium | 8.69e-09 | 2 |
atrioventricular valve | 1.14e-08 | 2 |
large intestine | 1.15e-08 | 11 |
compound organ | 1.51e-08 | 68 |
colon | 3.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.36e-09 | 2 |