FFCP PHASE1:Hg19::chr2:220491920..220491931,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:220491920..220491931,+
|short_description=p15@SLC4A3
|description=CAGE_peak_15_at_SLC4A3_5end
|association_with_transcript=-117bp_to_ENST00000358055_5end
...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt=P48751 | |UniProt=P48751 | ||
|association_with_transcript=-117bp_to_ENST00000358055_5end | |||
|cluster_id=chr2:220491920..220491931,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_15_at_SLC4A3_5end | |||
|id=chr2:220491920..220491931,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.62e-41;1!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:114!1.07e-08!2;DOID:4929!2.45e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.49e-79;2!DOID:178;2.21e-40;1!DOID:326;2.21e-40;1!DOID:3978;2.21e-40;1!DOID:3394;2.21e-40;1!DOID:5844;2.21e-40;1!DOID:1287;2.71e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.49e-79,2;DOID:178,2.21e-40,1;DOID:326,2.21e-40,1;DOID:3978,2.21e-40,1;DOID:3394,2.21e-40,1;DOID:5844,2.21e-40,1;DOID:1287,2.71e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0003296!3.77e-15!4;UBERON:0010133!3.77e-15!4;UBERON:0007023!7.78e-14!115;UBERON:0000955!2.41e-12!69;UBERON:0006238!2.41e-12!69;UBERON:0003978!4.78e-12!3;UBERON:0009751!4.78e-12!3;UBERON:0000946!4.78e-12!3;UBERON:0002523!4.78e-12!3;UBERON:0005983!4.78e-12!3;UBERON:0002165!4.78e-12!3;UBERON:0002062!4.78e-12!3;UBERON:0007280!4.78e-12!3;UBERON:0005743!1.42e-11!86;UBERON:0000073!3.31e-11!94;UBERON:0001016!3.31e-11!94;UBERON:0001049!5.45e-11!57;UBERON:0005068!5.45e-11!57;UBERON:0006241!5.45e-11!57;UBERON:0007135!5.45e-11!57;UBERON:0001017!5.56e-11!82;UBERON:0000473!6.96e-11!8;UBERON:0003075!9.78e-11!86;UBERON:0007284!9.78e-11!86;UBERON:0002616!1.68e-10!59;UBERON:0002346!4.68e-10!90;UBERON:0001894!1.19e-08!7;UBERON:0006222!1.19e-08!7;UBERON:0000007!1.48e-08!2;UBERON:0002133!1.53e-08!2;UBERON:0001905!2.72e-08!2;UBERON:0002757!2.72e-08!2;UBERON:0010134!2.72e-08!2;UBERON:0002784!2.72e-08!2;UBERON:0005408!2.72e-08!2;UBERON:0001899!2.72e-08!2;UBERON:0003135!8.16e-08!11;UBERON:0002780!1.58e-07!41;UBERON:0001890!1.58e-07!41;UBERON:0006240!1.58e-07!41;UBERON:0003080!2.65e-07!42;UBERON:0000153!5.12e-07!129;UBERON:0007811!5.12e-07!129;UBERON:0000033!8.75e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;2.21e-40;1!UBERON:0005623;2.21e-40;1!UBERON:0007100;6.14e-26;25!UBERON:0000007;5.69e-21;2!UBERON:0003978;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0003103;5.34e-09;61!UBERON:0000948;3.04e-08;22!UBERON:0001894;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.48e-40,1;UBERON:0005623,1.48e-40,1;UBERON:0007100,4.16e-24,27;UBERON:0000007,6.96e-21,2;UBERON:0003978,1.60e-14,3;UBERON:0009751,1.60e-14,3;UBERON:0000946,1.60e-14,3;UBERON:0002523,1.60e-14,3;UBERON:0005983,1.60e-14,3;UBERON:0002165,1.60e-14,3;UBERON:0002062,1.60e-14,3;UBERON:0007280,1.60e-14,3;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0003103,5.09e-10,68;UBERON:0000948,1.19e-07,24;UBERON:0005498,1.19e-07,24;UBERON:0004140,1.19e-07,24;UBERON:0009881,1.19e-07,24;UBERON:0004141,1.19e-07,24;UBERON:0003084,1.19e-07,24;UBERON:0007005,1.19e-07,24;UBERON:0004139,1.19e-07,24;UBERON:0004291,1.19e-07,24;UBERON:0004797,5.70e-07,7;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,1.60412296808179,0.717873024576814,1.19807400299395,2.14613024068285,0.446342914883745,3.02325626190268,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,1.13831095675649,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.36757959813938,0,0.303114792872958,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,1.60412296808179,0.717873024576814,1.19807400299395,2.14613024068285,0.446342914883745,3.02325626190268,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,1.13831095675649,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.36757959813938,0,0.303114792872958,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p15@SLC4A3 | |||
}} | }} |
Latest revision as of 22:13, 24 September 2015
Short description: | p15@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -117bp_to_ENST00000358055_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | P48751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.48e-40 | 1 |
semi-lunar valve | 1.48e-40 | 1 |
primary circulatory organ | 4.16e-24 | 27 |
pituitary gland | 6.96e-21 | 2 |
valve | 1.60e-14 | 3 |
cardiac mesenchyme | 1.60e-14 | 3 |
cardial valve | 1.60e-14 | 3 |
tunica intima | 1.60e-14 | 3 |
heart layer | 1.60e-14 | 3 |
endocardium | 1.60e-14 | 3 |
endocardial cushion | 1.60e-14 | 3 |
presumptive endocardium | 1.60e-14 | 3 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
compound organ | 5.09e-10 | 68 |
heart | 1.19e-07 | 24 |
primitive heart tube | 1.19e-07 | 24 |
primary heart field | 1.19e-07 | 24 |
anterior lateral plate mesoderm | 1.19e-07 | 24 |
heart tube | 1.19e-07 | 24 |
heart primordium | 1.19e-07 | 24 |
cardiac mesoderm | 1.19e-07 | 24 |
cardiogenic plate | 1.19e-07 | 24 |
heart rudiment | 1.19e-07 | 24 |
blood vessel layer | 5.70e-07 | 7 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.49e-79 | 2 |
vascular disease | 2.21e-40 | 1 |
ischemia | 2.21e-40 | 1 |
extrinsic cardiomyopathy | 2.21e-40 | 1 |
myocardial ischemia | 2.21e-40 | 1 |
myocardial infarction | 2.21e-40 | 1 |
cardiovascular system disease | 2.71e-40 | 4 |