FFCP PHASE1:Hg19::chr2:233243424..233243433,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:233243424..233243433,+
|short_description=p2@ALPP
|description=CAGE_peak_2_at_ALPP_5end
|association_with_transcript=0bp_to_ENST00000474529_5end
|EntrezGe...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=250 | |EntrezGene=250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=439 | |HGNC=439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474529_5end | |||
|cluster_id=chr2:233243424..233243433,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_2_at_ALPP_5end | |||
|id=chr2:233243424..233243433,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.15e-13!254;CL:0002541!5.98e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.75e-19;3!CL:0000349;8.50e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.53e-19,3;CL:0000349,8.89e-08,19;CL:0000066,3.28e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.84e-20;29!UBERON:0003124;6.59e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.23e-27!106;DOID:0050687!3.57e-22!143;DOID:162!4.99e-15!235;DOID:14566!1.69e-14!239;DOID:1749!1.37e-07!14;DOID:4929!5.54e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:178;2.66e-07;1!DOID:326;2.66e-07;1!DOID:3978;2.66e-07;1!DOID:3394;2.66e-07;1!DOID:5844;2.66e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.80e-13,106;DOID:0050687,3.57e-10,143;DOID:178,2.83e-07,1;DOID:326,2.83e-07,1;DOID:3978,2.83e-07,1;DOID:3394,2.83e-07,1;DOID:5844,2.83e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.65e-30!9;UBERON:0005631!2.05e-17!14;UBERON:0000158!2.05e-17!14;UBERON:0003124!1.18e-16!7;UBERON:0001557!2.14e-16!19;UBERON:0008947!4.53e-16!38;UBERON:0003258!4.53e-16!38;UBERON:0000077!1.60e-15!130;UBERON:0004119!6.33e-13!169;UBERON:0000925!6.33e-13!169;UBERON:0006595!6.33e-13!169;UBERON:0000065!4.99e-12!53;UBERON:0004921!5.72e-12!129;UBERON:0004185!5.72e-12!129;UBERON:0000476!5.98e-11!3;UBERON:0000920!5.98e-11!3;UBERON:0000072!6.12e-11!46;UBERON:0001007!1.20e-10!155;UBERON:0001555!1.20e-10!155;UBERON:0007026!1.20e-10!155;UBERON:0000478!2.05e-09!24;UBERON:0001041!3.22e-09!98;UBERON:0001004!5.68e-09!72;UBERON:0004923!6.94e-09!57;UBERON:0001987!7.63e-08!4;UBERON:0004340!7.63e-08!4;UBERON:0000064!5.59e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.20e-56;9!UBERON:0001557;4.20e-56;9!UBERON:0003124;3.75e-19;3!UBERON:0000920;3.75e-19;3!UBERON:0005631;5.26e-15;10!UBERON:0000158;5.26e-15;10!UBERON:0000072;2.40e-14;37!UBERON:0000065;1.10e-11;44!UBERON:0000478;1.09e-08;24!UBERON:0000997;2.66e-07;1!UBERON:0005056;2.66e-07;1!UBERON:0004176;2.66e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.20e-56,9;UBERON:0001557,8.30e-26,19;UBERON:0000920,3.53e-19,3;UBERON:0005631,2.99e-15,14;UBERON:0000158,2.99e-15,14;UBERON:0008947,6.04e-15,38;UBERON:0003258,6.04e-15,38;UBERON:0003124,1.45e-14,7;UBERON:0000072,9.76e-12,47;UBERON:0000065,5.54e-10,54;UBERON:0000478,1.14e-08,24;UBERON:0000997,2.50e-07,1;UBERON:0005056,2.50e-07,1;UBERON:0001004,8.26e-07,74;UBERON:0001041,9.31e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.4460916233884,60.3533190479604,47.2381618571625,67.4999113122251,60.3526060135965,40.8105464871086,68.7639671616839,58.4739966073531,49.247636089138,0,0,0,0,0,0,0,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2822467622143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8102261037207,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,1.19512109114209,16.9070614657917,6.96141709854154,6.39641731222362,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74378712760257,6.00708525404778,0,0,0,0.219267951258557,0,0,0,0,0.137041924646751,0,0,1.75996244461323,0,0,8.39200360244947,0,0,0,0,0,0.942776138467182,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,2.59582700648688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.640724475406168,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,3.28926074368061,0,0,0,0,4.49059444250558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.808679663052368,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,127.997520144688,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.917899467677836,0,1.74600309116205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,1.25755282949222,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.4460916233884,60.3533190479604,47.2381618571625,67.4999113122251,60.3526060135965,40.8105464871086,68.7639671616839,58.4739966073531,49.247636089138,0,0,0,0,0,0,0,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2822467622143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8102261037207,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,1.19512109114209,16.9070614657917,6.96141709854154,6.39641731222362,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74378712760257,6.00708525404778,0,0,0,0.219267951258557,0,0,0,0,0.137041924646751,0,0,1.75996244461323,0,0,8.39200360244947,0,0,0,0,0,0.942776138467182,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,2.59582700648688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.640724475406168,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,3.28926074368061,0,0,0,0,4.49059444250558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.808679663052368,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,127.997520144688,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.917899467677836,0,1.74600309116205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,1.25755282949222,0,0,0,0,0,0 | ||
|short_description=p2@ALPP | |||
}} | }} |
Latest revision as of 21:01, 15 September 2015
Short description: | p2@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000474529_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.53e-19 | 3 |
extraembryonic cell | 8.89e-08 | 19 |
epithelial cell | 3.28e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.20e-56 | 9 |
upper respiratory tract | 8.30e-26 | 19 |
egg chorion | 3.53e-19 | 3 |
extraembryonic membrane | 2.99e-15 | 14 |
membranous layer | 2.99e-15 | 14 |
respiratory primordium | 6.04e-15 | 38 |
endoderm of foregut | 6.04e-15 | 38 |
chorion | 1.45e-14 | 7 |
segment of respiratory tract | 9.76e-12 | 47 |
respiratory tract | 5.54e-10 | 54 |
extraembryonic structure | 1.14e-08 | 24 |
mammalian vulva | 2.50e-07 | 1 |
external female genitalia | 2.50e-07 | 1 |
respiratory system | 8.26e-07 | 74 |
foregut | 9.31e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.80e-13 | 106 |
cell type cancer | 3.57e-10 | 143 |
vascular disease | 2.83e-07 | 1 |
ischemia | 2.83e-07 | 1 |
extrinsic cardiomyopathy | 2.83e-07 | 1 |
myocardial ischemia | 2.83e-07 | 1 |
myocardial infarction | 2.83e-07 | 1 |