FFCP PHASE1:Hg19::chr2:46602901..46602926,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:46602901..46602926,+
|short_description=p7@EPAS1
|description=CAGE_peak_7_at_EPAS1_5end
|association_with_transcript=126bp_to_ENST00000483692_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2034 | |EntrezGene=2034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3374 | |HGNC=3374 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=126bp_to_ENST00000483692_5end | |||
|cluster_id=chr2:46602901..46602926,+ | |||
|coexpression_cluster_id=C2700 | |||
|description=CAGE_peak_7_at_EPAS1_5end | |||
|id=chr2:46602901..46602926,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.29e-09!119;CL:0000213!1.98e-08!57;CL:0000215!1.98e-08!57;CL:0000115!3.02e-07!35;CL:0000066!3.40e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.78e-08;36!CL:0002139;4.54e-08;24!CL:0000349;8.58e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.99e-10,36;CL:0000213,2.96e-09,58;CL:0000215,2.96e-09,58;CL:0002078,9.25e-09,45;CL:0002139,5.51e-08,24;CL:0000349,1.30e-07,19;CL:0000222,3.92e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.71e-15!659;UBERON:0000477!4.63e-14!286;UBERON:0004111!2.35e-12!241;UBERON:0000467!2.38e-12!625;UBERON:0000480!4.00e-12!626;UBERON:0000483!5.18e-12!309;UBERON:0000119!6.49e-12!312;UBERON:0000481!1.01e-10!347;UBERON:0003914!1.77e-09!118;UBERON:0000062!4.07e-09!511;UBERON:0000923!4.50e-09!604;UBERON:0005291!4.50e-09!604;UBERON:0006598!4.50e-09!604;UBERON:0002532!4.50e-09!604;UBERON:0002050!6.97e-09!605;UBERON:0005423!6.97e-09!605;UBERON:0000475!9.70e-09!365;UBERON:0000922!1.77e-08!612;UBERON:0004872!5.32e-08!84;UBERON:0000064!1.66e-07!219;UBERON:0000025!1.72e-07!194;UBERON:0004119!2.67e-07!169;UBERON:0000925!2.67e-07!169;UBERON:0006595!2.67e-07!169;UBERON:0005256!3.36e-07!143;UBERON:0002100!3.62e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.14e-07;24!UBERON:0005631;7.34e-07;10!UBERON:0000158;7.34e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.65e-08,117;UBERON:0004111,3.89e-08,240;UBERON:0005631,6.26e-08,14;UBERON:0000158,6.26e-08,14;UBERON:0004872,1.36e-07,83;UBERON:0000478,3.15e-07,24;UBERON:0000055,5.05e-07,68;UBERON:0002049,6.95e-07,78;UBERON:0007798,6.95e-07,78;UBERON:0001009,8.30e-07,112 | |||
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|phase1_expression=0.908391896352783,8.34992043174834,4.08767771878316,1.0007329835313,4.91657203870017,6.97870819280295,2.53299878168311,0,1.04474251279935,0.245733936501509,1.39560233594486,1.31064823278103,1.84636884759917,0.37129905888014,1.98838425436749,1.34465029290355,1.80808358407193,2.92124036154949,1.95173119516203,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0.309632246632152,0,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.255725123687061,2.53007406669196,2.50668955317945,6.22840031531542,0,1.94653948121054,0.378139268656271,1.33037638477538,1.49319135678314,1.30979075497713,1.09288586487763,1.48313777113772,0,0,0.531831842075461,0,0,0,0.198762407366705,0.860234595106124,0,0,3.77549492588915,5.77747888074142,2.29894463190492,2.58416759169329,2.84613010149368,5.02080919147005,2.41697590265488,2.28081631715554,7.32186172644509,1.47065232138347,8.1014194788176,2.67899184852239,1.34717623575702,1.12611480483322,0,0,0.916008719652036,0,0,0,0.993943903390637,1.01304409331664,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,2.1349799145941,1.2333377420858,1.24484414159907,2.82892411346345,1.79808093424805,0.302714855289863,0,0.468642863667593,0.936480230490962,0.570471821544449,1.19558944441441,0,0,0.421352420106746,0.408308342509787,0.491337269247072,0.929932030581889,7.12801714369232,11.8688126053707,0,2.15585442544872,0,0.500474079487857,0,0.877955241761676,4.29082914118628,5.40857012063748,0.567160915800105,0.179389635688862,2.13557388818567,1.69545520927649,0.300091096084402,0.92747276314595,0,1.11670113798954,0.337552664482532,1.65642908774038,0.504867548488229,0.920498986422993,1.45481451136931,0,1.20902517873168,0.508681776931463,0.386521706326594,0.818238361772504,0,0,0,0,0.207322110030741,0,0,0,4.5026865673502,0,1.39310378409594,0.721879481669586,0.473227200159376,0.505754070234305,0.723033089650446,0.772057809126758,0.871517776369625,0.237270619111097,0.539325232640658,0.784885860501384,0.38474715694639,7.38155454624648,4.20725321410337,0.4115740113314,1.47008711385542,1.26755034821831,0,2.36315962672562,0,0.614942192715568,1.20097467208968,0.878002283269004,1.1240175325762,1.10581869652794,0.740707561268237,0.325808305310325,0,0,0.115930404975077,0.587043471179108,2.88732895522148,2.31492756288305,3.42457474022277,0,0,0.492434012174795,0,0.594524649154913,0,0.335964256397719,0.708875486211932,0.358234090811393,0.290633938513962,0.383382679165211,0.492663237895943,0.528290604079356,0,0.432359860250884,0.6312121671319,0.063497894292169,0.381988425558278,0,0,0.616964956219941,0,0.571652865261156,0.112131084345361,0.43596006883328,0.2933531432838,1.55126058909333,0,2.535908257668,3.19125739901845,1.04007436911366,0.514414748524284,0,0,1.00084595560703,1.08524321078289,2.46972101034231,0.325736184293735,1.06617584622764,0.791951872933429,1.20575750823834,0.871533458600294,1.99945982364114,1.2162378064119,1.00451418286425,2.10833939483032,0.718874566474748,2.29723871668228,0,0.579125226670317,1.84928690295345,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,2.00068208423871,0.813795071099207,3.95144636908534,12.4900292158013,5.67728694122165,1.28855556491985,0.300946099727719,2.27407504055985,0,0,0,2.08520674723399,0.195801157462741,0,0,0,0,0.303127571446259,1.66435439510497,3.32629322662648,1.73675465473144,0.153461973288062,2.52594084989766,2.94720043288112,1.02341449813341,2.0911009748669,1.48418066444991,0.154209693802656,0.177561725313127,0.410635780069046,0,0.232420756919918,0.725156697549733,2.00506470303285,1.47329582297434,1.83703117063371,4.73437036817464,6.29397191805236,0.451199612907412,0.308061348417659,0.784349769176855,0,0.105551628892876,12.5106722477986,2.89159298970077,2.37507507712353,7.71136263451447,0.541892875087706,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0.769350375349168,0.656029291399411,4.55529752530024,2.7821073144885,0,0,1.14853107599234,3.90036147621913,1.6068392984416,0.386682873168488,0.770243085573222,1.07452572308291,0.551346289938122,0.214840489736547,0.435050081742686,0.596586391912706,0,2.80984356113663,2.49847087574638,0.255225424989168,1.11273558941105,3.253918845081,0.31481234683064,0,1.23213432070436,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0.632758849437452,4.95638504201945,0.511795582622668,1.28381696410176,0.318203247925937,0,1.43897966066652,2.47083326762449,1.29593642580255,0.808729926293264,0,0,0.975267478179181,1.70599442741899,4.22600587027022,0.682499557039929,4.52497382251881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| ||
|short_description=p7@EPAS1 | |||
}} | }} |
Latest revision as of 10:37, 17 September 2015
Short description: | p7@EPAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EPAS1_5end |
Coexpression cluster: | C2700_chorionic_lung_Fibroblast_Olfactory_Renal_Endothelial_Hepatic |
Association with transcript: | 126bp_to_ENST00000483692_5end |
EntrezGene: | EPAS1 |
HGNC: | 3374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.99e-10 | 36 |
lining cell | 2.96e-09 | 58 |
barrier cell | 2.96e-09 | 58 |
meso-epithelial cell | 9.25e-09 | 45 |
endothelial cell of vascular tree | 5.51e-08 | 24 |
extraembryonic cell | 1.30e-07 | 19 |
mesodermal cell | 3.92e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.65e-08 | 117 |
anatomical conduit | 3.89e-08 | 240 |
extraembryonic membrane | 6.26e-08 | 14 |
membranous layer | 6.26e-08 | 14 |
splanchnic layer of lateral plate mesoderm | 1.36e-07 | 83 |
extraembryonic structure | 3.15e-07 | 24 |
vessel | 5.05e-07 | 68 |
vasculature | 6.95e-07 | 78 |
vascular system | 6.95e-07 | 78 |
circulatory system | 8.30e-07 | 112 |