FFCP PHASE1:Hg19::chr3:112128019..112128034,-: Difference between revisions
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|id=chr3:112128019..112128034,-
|short_description=p1@ENST00000486726
|description=CAGE_peak_1_at_ENST00000486726_5end
|association_with_transcript=-38bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENST00000486726_5end | |||
|cluster_id=chr3:112128019..112128034,- | |||
|coexpression_cluster_id=C1917 | |||
|description=CAGE_peak_1_at_ENST00000486726_5end | |||
|id=chr3:112128019..112128034,- | |||
|ontology_enrichment_celltype=CL:1000507!5.55e-25!12;CL:1000494!5.55e-25!12;CL:1000449!2.07e-18!16;CL:1000497!3.21e-16!18;CL:0002518!3.21e-16!18;CL:0000239!2.10e-15!3;CL:1000615!2.10e-15!3;CL:0002306!2.10e-15!3;CL:0002681!6.61e-13!13;CL:0002584!6.61e-13!13;CL:0000244!2.15e-11!4;CL:0000731!2.15e-11!4;CL:0002231!3.72e-07!3;CL:0002541!5.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.81e-35;10!CL:1000494;1.81e-35;10!CL:1000449;1.06e-23;15!CL:1000497;6.30e-21;17!CL:0002518;6.30e-21;17!CL:0000239;8.66e-20;3!CL:1000615;8.66e-20;3!CL:0002306;8.66e-20;3!CL:0000313;1.78e-15;1!CL:0002681;2.97e-11;12!CL:0002584;2.97e-11;12!CL:0000159;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.69e-35,10;CL:1000494,1.69e-35,10;CL:1000449,1.01e-23,15;CL:1000497,6.04e-21,17;CL:0002518,6.04e-21,17;CL:0000239,8.67e-20,3;CL:1000615,8.67e-20,3;CL:0002306,8.67e-20,3;CL:0000313,1.78e-15,1;CL:0002681,3.02e-11,12;CL:0002584,3.02e-11,12;CL:0000159,2.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.29e-08;2!UBERON:0003104;7.70e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.78e-15;1!DOID:4468;1.20e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.78e-15,1;DOID:4468,1.20e-08,2 | |||
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|short_description=p1@ENST00000486726 | |||
}} | }} |
Latest revision as of 14:15, 29 July 2015
Short description: | p1@ENST00000486726 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000486726_5end |
Coexpression cluster: | C1917_clear_epididymis_serous_uterus_kidney_B_ductus |
Association with transcript: | -38bp_to_ENST00000486726_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.69e-35 | 10 |
nephron tubule epithelial cell | 1.69e-35 | 10 |
epithelial cell of nephron | 1.01e-23 | 15 |
kidney cell | 6.04e-21 | 17 |
kidney epithelial cell | 6.04e-21 | 17 |
brush border epithelial cell | 8.67e-20 | 3 |
kidney cortex tubule cell | 8.67e-20 | 3 |
epithelial cell of proximal tubule | 8.67e-20 | 3 |
serous secreting cell | 1.78e-15 | 1 |
kidney cortical cell | 3.02e-11 | 12 |
renal cortical epithelial cell | 3.02e-11 | 12 |
seromucus secreting cell | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.78e-15 | 1 |
clear cell adenocarcinoma | 1.20e-08 | 2 |