FFCP PHASE1:Hg19::chr3:127541401..127541426,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:127541401..127541426,-
|short_description=p5@MGLL
|description=CAGE_peak_5_at_MGLL_5end
|association_with_transcript=-207bp_to_ENST00000453507_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11343 | |EntrezGene=11343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17038 | |HGNC=17038 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z9D1 | |UniProt=B7Z9D1 | ||
|association_with_transcript=-207bp_to_ENST00000453507_5end | |||
|cluster_id=chr3:127541401..127541426,- | |||
|description=CAGE_peak_5_at_MGLL_5end | |||
|id=chr3:127541401..127541426,- | |||
|ontology_enrichment_celltype=CL:0002078!1.56e-13!44;CL:0000115!1.58e-12!35;CL:0002139!3.34e-10!24;CL:0000071!5.30e-09!18;CL:0002546!5.30e-09!18;CL:0000213!5.48e-08!57;CL:0000215!5.48e-08!57;CL:0000222!8.38e-08!119;CL:1000449!3.58e-07!16;CL:1000413!3.65e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.96e-11;36!CL:1000413;6.38e-11;9!CL:1000449;1.14e-09;15!CL:0002078;1.26e-08;45!CL:0002681;1.38e-08;12!CL:0002584;1.38e-08;12!CL:0002544;2.66e-08;6!CL:1000497;4.29e-08;17!CL:0002518;4.29e-08;17!CL:0000071;8.01e-08;18!CL:0002139;9.87e-08;24!CL:1000507;1.98e-07;10!CL:1000494;1.98e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.35e-13,36;CL:0002078,2.33e-12,45;CL:1000413,5.59e-11,9;CL:1000449,6.81e-10,15;CL:0002681,7.65e-09,12;CL:0002584,7.65e-09,12;CL:0002544,2.61e-08,6;CL:1000497,2.77e-08,17;CL:0002518,2.77e-08,17;CL:0002139,4.56e-08,24;CL:0000071,6.62e-08,18;CL:0002546,6.62e-08,18;CL:0000213,1.92e-07,58;CL:0000215,1.92e-07,58;CL:1000507,2.15e-07,10;CL:1000494,2.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;8.01e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!5.69e-13!625;UBERON:0000480!9.37e-13!626;UBERON:0000119!4.28e-12!312;UBERON:0000477!8.87e-12!286;UBERON:0000483!1.17e-11!309;UBERON:0000064!1.30e-11!219;UBERON:0000468!2.18e-11!659;UBERON:0000475!2.49e-10!365;UBERON:0004111!2.84e-09!241;UBERON:0001986!5.30e-09!18;UBERON:0004638!5.30e-09!18;UBERON:0004852!5.30e-09!18;UBERON:0000481!1.63e-08!347;UBERON:0005256!6.10e-08!143;UBERON:0000025!2.42e-07!194;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0004211!3.58e-07!16;UBERON:0001285!3.58e-07!16;UBERON:0007684!3.58e-07!16;UBERON:0003220!3.58e-07!16;UBERON:0004208!3.58e-07!16;UBERON:0003915!3.65e-07!9;UBERON:0004700!3.65e-07!9;UBERON:0001917!3.65e-07!9;UBERON:0002050!4.36e-07!605;UBERON:0005423!4.36e-07!605;UBERON:0006555!5.98e-07!17;UBERON:0005103!5.98e-07!17;UBERON:0000083!5.98e-07!17;UBERON:0009201!5.98e-07!17;UBERON:0004819!5.98e-07!17;UBERON:0006553!5.98e-07!17;UBERON:0003074!5.98e-07!17;UBERON:0003060!5.98e-07!17;UBERON:0000487!6.12e-07!22;UBERON:0000080!8.43e-07!18;UBERON:0002120!8.43e-07!18;UBERON:0004875!8.43e-07!18;UBERON:0005721!8.43e-07!18;UBERON:0005754!8.43e-07!18;UBERON:0007297!8.43e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;6.38e-11;9!UBERON:0004700;6.38e-11;9!UBERON:0001917;6.38e-11;9!UBERON:0006555;1.14e-09;15!UBERON:0004819;1.14e-09;15!UBERON:0001285;1.14e-09;15!UBERON:0007684;1.14e-09;15!UBERON:0001225;1.38e-08;12!UBERON:0008987;1.38e-08;12!UBERON:0002067;3.09e-08;9!UBERON:0000353;6.19e-08;15!UBERON:0004638;8.01e-08;18!UBERON:0001986;8.01e-08;18!UBERON:0004852;8.01e-08;18!UBERON:0004211;1.98e-07;10!UBERON:0009773;1.98e-07;10!UBERON:0001231;1.98e-07;10!UBERON:0004810;1.98e-07;10!UBERON:0000487;6.47e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,5.59e-11,9;UBERON:0004700,5.59e-11,9;UBERON:0001917,5.59e-11,9;UBERON:0004211,6.81e-10,15;UBERON:0009773,6.81e-10,15;UBERON:0001231,6.81e-10,15;UBERON:0001285,6.81e-10,15;UBERON:0007684,6.81e-10,15;UBERON:0004208,6.81e-10,15;UBERON:0006555,4.91e-09,16;UBERON:0004819,4.91e-09,16;UBERON:0000119,5.72e-09,309;UBERON:0001225,7.65e-09,12;UBERON:0008987,7.65e-09,12;UBERON:0002067,1.43e-08,9;UBERON:0004016,1.43e-08,9;UBERON:0010083,1.43e-08,9;UBERON:0000483,2.47e-08,306;UBERON:0000353,3.82e-08,15;UBERON:0004638,6.62e-08,18;UBERON:0001986,6.62e-08,18;UBERON:0004852,6.62e-08,18;UBERON:0004810,2.15e-07,10;UBERON:0004111,2.34e-07,240;UBERON:0000487,5.38e-07,22 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,1.26343974685366,1.04474251279935,2.45733936501509,7.6758128476967,0.218441372130172,0,0.37129905888014,0,1.34465029290355,0,0.730310090387373,0,0.61560529038394,0.612002073732759,0.626909442956176,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,2.409647350226,0.739508020333575,0,0,0,0.553995408531877,0,0.217010870715852,2.01523926815932,2.26725566213286,1.54545340580512,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,1.24564449799115,0,0,0,0.605399502633369,0,0.316462387440884,0,1.06302149982522,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.785874452986276,1.09288586487763,0.741568885568859,0,0.870648686496336,0.531831842075461,0,0,0,3.18019851786728,3.4409383804245,5.55424802572151,3.39184765154406,4.61449379830897,1.6507082516404,2.08994966536811,1.29208379584664,0.35576626268671,0.66944122552934,0.402829317109147,1.52054421143703,0.976248230192678,2.57364156242108,4.86085168729056,0.714397826272638,0.898117490504679,0.900891843866578,4.5994991239765,0.949265659568129,3.29763139074733,0,0,0,1.98788780678127,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,1.05950199351452,0,1.87457145467037,1.87296046098192,5.13424639390004,1.64393548606981,1.05691048779388,2.26622122115384,1.96631129383148,2.44985005505872,2.45668634623536,0.723280468230358,3.56400857184616,1.7308685049499,2.73048408581408,1.43723628363248,2.18836948140286,1.00094815897571,3.04770527032601,0.438977620880838,0,1.20190447125277,0.113432183160021,0.358779271377724,0.427114777637135,0.847727604638247,0.600182192168805,0.824420233907511,0.257640540045629,0.744467425326359,0.337552664482532,0.194874010322397,0.504867548488229,0.276149695926898,0.323292113637624,0,0.201504196455281,0.847802961552438,1.15956511897978,0.545492241181669,2.86804595389004,0,0,0,0,0,0,4.69348596989448,1.28648187638577,1.38134921352481,0,0,0.828147600278907,1.18009283054671,0.241011029883482,0.441175890929576,1.52515610864684,1.18635309555548,1.48314438976181,1.17732879075208,1.15424147083917,0,4.20725321410337,0,0,1.26755034821831,2.94848165003288,0,0,0.245976877086227,0.857839051492628,1.31700342490351,3.37205259772859,0.804231779293047,0,1.3032332212413,1.03993478527958,0,0.115930404975077,0,1.87676382089396,1.85194205030644,0.951270761172991,0,0,0.984868024349589,1.40402559083543,0.445893486866185,0.93733833986777,0.503946384596579,1.41775097242386,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,5.83081638595876,0,2.3468251462704,0.129271715757778,0,0.845302752556,1.32969058292435,4.16029747645464,1.02882949704857,2.83698264046557,2.93064396917709,0.285955987316295,0.542621605391443,0,0.977208552881205,0,0,0,0,0.199945982364114,0,2.00902836572851,0,1.91699884393266,1.14861935834114,2.85273810081437,2.75084482668401,0.61642896765115,1.25342674267927,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,1.24782516918484,1.78428988797162,0.157702415033935,2.22568688486155,1.20378439891088,0,0,0,0,1.73767228936166,4.50342662164303,2.40200396667599,0,0,0.106727557803444,0,1.66435439510497,0,1.24053903909388,0.153461973288062,0.841980283299221,0.896974044789907,1.02341449813341,1.28683136914886,0,1.3878872442239,0,1.23190734020714,1.55776328755086,0.813472649219715,0.725156697549733,1.20303882181971,1.19705285616665,0.34444334449382,2.00300284807389,0.786746489756545,3.60959690325929,1.61732207919271,2.35304930753057,7.30696123266303,0.73886140225013,2.27466768141793,1.87103075804167,0,1.54227252690289,0.270946437543853,2.00675909541941,5.09752546090077,4.15538004464362,3.35812132083267,0,0,0,0,0,0.618246069886334,0.183138929636687,0.082509499920588,1.14853107599234,0,0,0.48335359146061,0.308097234229289,0.15350367472613,1.10269257987624,0.214840489736547,0,0.511359764496605,0,1.32227932288782,0.384380134730212,0.127612712494584,0.708104465988849,0.464845549297286,0,1.3940745403212,0,0,0.869932992075073,1.11194531462352,0.286249773483982,2.60510858551767,2.21465597303108,0.190630193923825,4.86205803491534,0.855877976067841,0.95460974377781,0.78494864019923,1.43897966066652,1.09814811894422,1.53156123049392,0.808729926293264,0,0,1.46290121726877,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,1.01455188481352,0.92947049429925,0.281695602532241,0,0.0982490410131212,1.78335525740625,0,0.844430541190656,0.658589785919804,1.51789269506286,0.699869440489966,0.577332676353072,0.670302275535787,0,0.564862804660675,0.86101074534246,0,0.8868603070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| ||
|short_description=p5@MGLL | |||
}} | }} |
Latest revision as of 05:55, 20 September 2015
Short description: | p5@MGLL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MGLL_5end |
Coexpression cluster: | NA |
Association with transcript: | -207bp_to_ENST00000453507_5end |
EntrezGene: | MGLL |
HGNC: | 17038 |
UniProt: | B7Z9D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.35e-13 | 36 |
meso-epithelial cell | 2.33e-12 | 45 |
endothelial cell of artery | 5.59e-11 | 9 |
epithelial cell of nephron | 6.81e-10 | 15 |
kidney cortical cell | 7.65e-09 | 12 |
renal cortical epithelial cell | 7.65e-09 | 12 |
aortic endothelial cell | 2.61e-08 | 6 |
kidney cell | 2.77e-08 | 17 |
kidney epithelial cell | 2.77e-08 | 17 |
endothelial cell of vascular tree | 4.56e-08 | 24 |
blood vessel endothelial cell | 6.62e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.62e-08 | 18 |
lining cell | 1.92e-07 | 58 |
barrier cell | 1.92e-07 | 58 |
kidney tubule cell | 2.15e-07 | 10 |
nephron tubule epithelial cell | 2.15e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 5.59e-11 | 9 |
arterial system endothelium | 5.59e-11 | 9 |
endothelium of artery | 5.59e-11 | 9 |
nephron epithelium | 6.81e-10 | 15 |
renal tubule | 6.81e-10 | 15 |
nephron tubule | 6.81e-10 | 15 |
nephron | 6.81e-10 | 15 |
uriniferous tubule | 6.81e-10 | 15 |
nephrogenic mesenchyme | 6.81e-10 | 15 |
excretory tube | 4.91e-09 | 16 |
kidney epithelium | 4.91e-09 | 16 |
cell layer | 5.72e-09 | 309 |
cortex of kidney | 7.65e-09 | 12 |
renal parenchyma | 7.65e-09 | 12 |
dermis | 1.43e-08 | 9 |
dermatome | 1.43e-08 | 9 |
future dermis | 1.43e-08 | 9 |
epithelium | 2.47e-08 | 306 |
parenchyma | 3.82e-08 | 15 |
blood vessel endothelium | 6.62e-08 | 18 |
endothelium | 6.62e-08 | 18 |
cardiovascular system endothelium | 6.62e-08 | 18 |
nephron tubule epithelium | 2.15e-07 | 10 |
anatomical conduit | 2.34e-07 | 240 |
simple squamous epithelium | 5.38e-07 | 22 |