FFCP PHASE1:Hg19::chr3:184032298..184032309,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:184032298..184032309,+
|short_description=p5@EIF4G1
|description=CAGE_peak_5_at_EIF4G1_5end
|association_with_transcript=8bp_to_ENST00000414031_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1981 | |EntrezGene=1981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3296 | |HGNC=3296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000414031_5end | |||
|cluster_id=chr3:184032298..184032309,+ | |||
|description=CAGE_peak_5_at_EIF4G1_5end | |||
|id=chr3:184032298..184032309,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.34e-26!254;CL:0002321!3.19e-10!248;CL:0000220!6.90e-10!246;CL:0000548!2.49e-09!679;CL:0000004!2.49e-09!679;CL:0000255!2.49e-09!679;CL:0000223!5.27e-09!59;CL:0000012!8.47e-09!682;CL:0000076!3.96e-08!62;CL:0002076!5.28e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.01e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.30e-27,253;CL:0000223,2.32e-09,58;CL:0002321,3.71e-09,250;CL:0000076,5.71e-09,63;CL:0002076,2.51e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.35e-19!239;DOID:162!1.08e-18!235;DOID:305!1.68e-16!106;DOID:0050687!5.61e-16!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.83e-17,235;DOID:14566,5.03e-17,239;DOID:305,8.30e-17,106;DOID:0050687,1.23e-15,143;DOID:1749,3.16e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.62e-11!169;UBERON:0000925!7.62e-11!169;UBERON:0006595!7.62e-11!169;UBERON:0005177!3.16e-10!107;UBERON:0003104!1.85e-09!238;UBERON:0009142!1.85e-09!238;UBERON:0001048!6.86e-09!168;UBERON:0000077!1.53e-08!130;UBERON:0000466!2.82e-08!126;UBERON:0005157!4.45e-08!51;UBERON:0001007!8.91e-08!155;UBERON:0001555!8.91e-08!155;UBERON:0007026!8.91e-08!155;UBERON:0001041!1.73e-07!98;UBERON:0000464!3.67e-07!104;UBERON:0009569!3.74e-07!113;UBERON:0002100!4.17e-07!216;UBERON:0000065!8.34e-07!53 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.86e-12,101;UBERON:0004119,1.06e-08,160;UBERON:0000925,1.06e-08,160;UBERON:0006595,1.06e-08,160;UBERON:0002100,4.59e-08,199;UBERON:0005157,8.91e-08,47;UBERON:0009569,3.28e-07,112;UBERON:0000065,4.20e-07,54;UBERON:0008947,7.19e-07,38;UBERON:0003258,7.19e-07,38;UBERON:0006554,7.62e-07,47;UBERON:0005181,9.16e-07,35 | |||
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| ||
|short_description=p5@EIF4G1 | |||
}} | }} |
Latest revision as of 01:50, 17 September 2015
Short description: | p5@EIF4G1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EIF4G1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000414031_5end |
EntrezGene: | EIF4G1 |
HGNC: | 3296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.30e-27 | 253 |
endodermal cell | 2.32e-09 | 58 |
embryonic cell | 3.71e-09 | 250 |
squamous epithelial cell | 5.71e-09 | 63 |
endo-epithelial cell | 2.51e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 8.86e-12 | 101 |
endoderm-derived structure | 1.06e-08 | 160 |
endoderm | 1.06e-08 | 160 |
presumptive endoderm | 1.06e-08 | 160 |
trunk | 4.59e-08 | 199 |
epithelial fold | 8.91e-08 | 47 |
subdivision of trunk | 3.28e-07 | 112 |
respiratory tract | 4.20e-07 | 54 |
respiratory primordium | 7.19e-07 | 38 |
endoderm of foregut | 7.19e-07 | 38 |
urinary system structure | 7.62e-07 | 47 |
thoracic segment organ | 9.16e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.83e-17 | 235 |
disease of cellular proliferation | 5.03e-17 | 239 |
carcinoma | 8.30e-17 | 106 |
cell type cancer | 1.23e-15 | 143 |
squamous cell carcinoma | 3.16e-07 | 14 |