FFCP PHASE1:Hg19::chr3:185420769..185420792,-: Difference between revisions
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|id=chr3:185420769..185420792,-
|short_description=p@chr3:185420769..185420792,-
|description=CAGE_peak_at_chr3:185420769..185420792,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:185420769..185420792,- | |||
|description=CAGE_peak_at_chr3:185420769..185420792,- | |||
|id=chr3:185420769..185420792,- | |||
|ontology_enrichment_celltype=CL:0002139!3.44e-39!24;CL:0000115!3.81e-32!35;CL:0002078!3.03e-27!44;CL:0000071!1.94e-26!18;CL:0002546!1.94e-26!18;CL:0000213!8.26e-20!57;CL:0000215!8.26e-20!57;CL:0002544!4.72e-15!6;CL:0005020!1.21e-14!6;CL:0002138!1.21e-14!6;CL:0005022!1.21e-14!6;CL:1000413!4.19e-14!9;CL:0002618!1.39e-11!3;CL:0002543!6.25e-10!6;CL:0000222!8.57e-08!119;CL:0000220!6.73e-07!246;CL:0002321!8.75e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000413;7.86e-29;9!CL:0000071;1.63e-25;18!CL:0000115;7.20e-20;36!CL:0002544;8.62e-20;6!CL:0002139;2.68e-19;24!CL:0002618;9.43e-11;3!CL:0002078;1.44e-10;45!CL:0000213;4.04e-10;58!CL:0000215;4.04e-10;58!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4!CL:0002188;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,8.25e-29,9;CL:0000071,1.97e-25,18;CL:0002546,1.97e-25,18;CL:0000115,6.57e-20,36;CL:0002544,8.63e-20,6;CL:0002139,3.09e-19,24;CL:0002078,5.15e-16,45;CL:0000213,1.64e-12,58;CL:0000215,1.64e-12,58;CL:0002618,1.20e-10,3;CL:0000306,2.11e-08,4;CL:0002222,2.11e-08,4;CL:0002224,2.11e-08,4;CL:0000076,1.23e-07,63;CL:0002188,5.08e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.63e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.94e-26!18;UBERON:0004638!1.94e-26!18;UBERON:0004852!1.94e-26!18;UBERON:0006914!2.57e-21!25;UBERON:0000487!4.23e-21!22;UBERON:0002049!3.01e-14!79;UBERON:0007798!3.01e-14!79;UBERON:0003915!4.19e-14!9;UBERON:0004700!4.19e-14!9;UBERON:0001917!4.19e-14!9;UBERON:0000055!8.09e-14!69;UBERON:0001473!6.83e-11!8;UBERON:0004536!6.83e-11!8;UBERON:0006558!6.83e-11!8;UBERON:0004535!8.54e-10!110;UBERON:0001009!2.15e-09!113;UBERON:0002465!1.23e-08!10;UBERON:0001981!2.04e-08!60;UBERON:0007500!2.04e-08!60;UBERON:0004537!2.04e-08!60;UBERON:0006965!2.04e-08!60;UBERON:0002075!2.95e-08!18;UBERON:0004872!7.41e-08!84;UBERON:0002066!4.33e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;7.86e-29;9!UBERON:0004700;7.86e-29;9!UBERON:0001917;7.86e-29;9!UBERON:0004638;1.63e-25;18!UBERON:0001986;1.63e-25;18!UBERON:0004852;1.63e-25;18!UBERON:0000487;5.39e-21;22!UBERON:0000490;1.11e-19;33!UBERON:0006914;1.50e-18;25!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4!UBERON:0002066;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,8.25e-29,9;UBERON:0004700,8.25e-29,9;UBERON:0001917,8.25e-29,9;UBERON:0004638,1.97e-25,18;UBERON:0001986,1.97e-25,18;UBERON:0004852,1.97e-25,18;UBERON:0000487,6.29e-21,22;UBERON:0006914,1.72e-18,25;UBERON:0010077,2.11e-08,4;UBERON:0005389,2.11e-08,4;UBERON:0000484,2.11e-08,4;UBERON:0002546,2.11e-08,4;UBERON:0000965,2.11e-08,4;UBERON:0001803,2.11e-08,4;UBERON:0003073,2.11e-08,4;UBERON:0005426,2.11e-08,4;UBERON:0007500,3.99e-08,59;UBERON:0001981,3.99e-08,59;UBERON:0004537,3.99e-08,59;UBERON:0006965,3.99e-08,59;UBERON:0000055,4.20e-07,68;UBERON:0002066,6.77e-07,5;UBERON:0001637,9.61e-07,42;UBERON:0003509,9.61e-07,42;UBERON:0004572,9.61e-07,42 | |||
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| ||
|short_description=p@chr3:185420769..185420792,- | |||
}} | }} |
Latest revision as of 19:02, 29 July 2015
Short description: | p@chr3:185420769..185420792, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:185420769..185420792, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 8.25e-29 | 9 |
blood vessel endothelial cell | 1.97e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.97e-25 | 18 |
endothelial cell | 6.57e-20 | 36 |
aortic endothelial cell | 8.63e-20 | 6 |
endothelial cell of vascular tree | 3.09e-19 | 24 |
meso-epithelial cell | 5.15e-16 | 45 |
lining cell | 1.64e-12 | 58 |
barrier cell | 1.64e-12 | 58 |
endothelial cell of umbilical vein | 1.20e-10 | 3 |
crystallin accumulating cell | 2.11e-08 | 4 |
vertebrate lens cell | 2.11e-08 | 4 |
lens epithelial cell | 2.11e-08 | 4 |
squamous epithelial cell | 1.23e-07 | 63 |
glomerular endothelial cell | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 8.25e-29 | 9 |
arterial system endothelium | 8.25e-29 | 9 |
endothelium of artery | 8.25e-29 | 9 |
blood vessel endothelium | 1.97e-25 | 18 |
endothelium | 1.97e-25 | 18 |
cardiovascular system endothelium | 1.97e-25 | 18 |
simple squamous epithelium | 6.29e-21 | 22 |
squamous epithelium | 1.72e-18 | 25 |
cuboidal epithelium | 2.11e-08 | 4 |
transparent eye structure | 2.11e-08 | 4 |
simple cuboidal epithelium | 2.11e-08 | 4 |
cranial placode | 2.11e-08 | 4 |
lens of camera-type eye | 2.11e-08 | 4 |
epithelium of lens | 2.11e-08 | 4 |
lens placode | 2.11e-08 | 4 |
lens vesicle | 2.11e-08 | 4 |
epithelial tube open at both ends | 3.99e-08 | 59 |
blood vessel | 3.99e-08 | 59 |
blood vasculature | 3.99e-08 | 59 |
vascular cord | 3.99e-08 | 59 |
vessel | 4.20e-07 | 68 |
umbilical vein | 6.77e-07 | 5 |
artery | 9.61e-07 | 42 |
arterial blood vessel | 9.61e-07 | 42 |
arterial system | 9.61e-07 | 42 |