FFCP PHASE1:Hg19::chr3:194991828..194991871,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:194991828..194991871,-
|short_description=p2@XXYLT1
|description=CAGE_peak_2_at_XXYLT1_5end
|association_with_transcript=23bp_to_NM_152531,uc003fum.3_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152002 | |EntrezGene=152002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26639 | |HGNC=26639 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBI6 | |UniProt=Q8NBI6 | ||
|association_with_transcript=23bp_to_NM_152531,uc003fum.3_5end | |||
|cluster_id=chr3:194991828..194991871,- | |||
|description=CAGE_peak_2_at_XXYLT1_5end | |||
|id=chr3:194991828..194991871,- | |||
|ontology_enrichment_celltype=CL:0000055!5.19e-21!180;CL:0000222!3.14e-19!119;CL:0002321!4.16e-16!248;CL:0000220!6.96e-16!246;CL:0000115!1.77e-15!35;CL:0002139!1.99e-15!24;CL:0000213!1.79e-13!57;CL:0000215!1.79e-13!57;CL:0002078!9.44e-13!44;CL:0000071!9.19e-12!18;CL:0002546!9.19e-12!18;CL:0000012!1.48e-11!682;CL:0000548!1.58e-11!679;CL:0000004!1.58e-11!679;CL:0000255!1.58e-11!679;CL:0000144!1.17e-10!625;CL:0000183!3.22e-09!59;CL:0000393!4.48e-09!60;CL:0000211!4.48e-09!60;CL:0002371!2.57e-08!591;CL:0000057!4.26e-08!75;CL:0000680!4.40e-08!57;CL:0000056!4.40e-08!57;CL:0000355!4.40e-08!57;CL:0000187!2.08e-07!54;CL:1000413!4.03e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.57e-15;24!CL:0000115;1.06e-13;36!CL:0000071;8.25e-12;18!CL:0002078;4.50e-09;45!CL:0000213;1.69e-08;58!CL:0000215;1.69e-08;58!CL:1000413;3.51e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.89e-20,121;CL:0002321,1.22e-16,250;CL:0000115,4.17e-16,36;CL:0002139,1.95e-15,24;CL:0000213,5.05e-14,58;CL:0000215,5.05e-14,58;CL:0002078,2.53e-13,45;CL:0000071,9.07e-12,18;CL:0002546,9.07e-12,18;CL:0000393,3.86e-09,61;CL:0000211,3.86e-09,61;CL:0000057,2.20e-08,76;CL:0000680,3.78e-08,58;CL:0000056,3.78e-08,58;CL:0000355,3.78e-08,58;CL:0000187,1.79e-07,55;CL:1000413,4.00e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;8.25e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.69e-20!79;UBERON:0007798!2.69e-20!79;UBERON:0000055!2.08e-17!69;UBERON:0004535!8.23e-17!110;UBERON:0004872!2.97e-16!84;UBERON:0001009!5.19e-16!113;UBERON:0003914!2.17e-14!118;UBERON:0001981!2.78e-14!60;UBERON:0007500!2.78e-14!60;UBERON:0004537!2.78e-14!60;UBERON:0006965!2.78e-14!60;UBERON:0001986!9.19e-12!18;UBERON:0004638!9.19e-12!18;UBERON:0004852!9.19e-12!18;UBERON:0001637!1.75e-11!42;UBERON:0003509!1.75e-11!42;UBERON:0004572!1.75e-11!42;UBERON:0000490!8.52e-10!138;UBERON:0000487!1.34e-09!22;UBERON:0006914!1.37e-09!25;UBERON:0004573!4.05e-08!33;UBERON:0004571!4.05e-08!33;UBERON:0003915!4.03e-07!9;UBERON:0004700!4.03e-07!9;UBERON:0001917!4.03e-07!9;UBERON:0001134!4.34e-07!61;UBERON:0002036!4.34e-07!61;UBERON:0003082!4.34e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.25e-12;18!UBERON:0001986;8.25e-12;18!UBERON:0004852;8.25e-12;18!UBERON:0000055;2.66e-11;65!UBERON:0007500;9.62e-10;56!UBERON:0001981;9.62e-10;56!UBERON:0004537;9.62e-10;56!UBERON:0000487;1.96e-09;22!UBERON:0001637;1.98e-09;42!UBERON:0003509;1.98e-09;42!UBERON:0004572;1.98e-09;42!UBERON:0002049;2.32e-09;75!UBERON:0007798;2.32e-09;75!UBERON:0006914;2.53e-09;25!UBERON:0004573;6.52e-08;33!UBERON:0004571;6.52e-08;33!UBERON:0003914;6.53e-08;74!UBERON:0003915;3.51e-07;9!UBERON:0004700;3.51e-07;9!UBERON:0001917;3.51e-07;9!UBERON:0000490;3.72e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.63e-20,78;UBERON:0007798,6.63e-20,78;UBERON:0000055,5.03e-17,68;UBERON:0004535,2.10e-16,109;UBERON:0004872,6.89e-16,83;UBERON:0001009,1.30e-15,112;UBERON:0003914,2.44e-14,117;UBERON:0007500,6.57e-14,59;UBERON:0001981,6.57e-14,59;UBERON:0004537,6.57e-14,59;UBERON:0006965,6.57e-14,59;UBERON:0004638,9.07e-12,18;UBERON:0001986,9.07e-12,18;UBERON:0004852,9.07e-12,18;UBERON:0001637,1.72e-11,42;UBERON:0003509,1.72e-11,42;UBERON:0004572,1.72e-11,42;UBERON:0000487,1.33e-09,22;UBERON:0006914,1.35e-09,25;UBERON:0000490,2.63e-09,148;UBERON:0007503,1.22e-08,78;UBERON:0004573,4.01e-08,33;UBERON:0004571,4.01e-08,33;UBERON:0001134,3.76e-07,62;UBERON:0002036,3.76e-07,62;UBERON:0003082,3.76e-07,62;UBERON:0003915,4.00e-07,9;UBERON:0004700,4.00e-07,9;UBERON:0001917,4.00e-07,9 | |||
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| ||
|short_description=p2@XXYLT1 | |||
}} | }} |
Latest revision as of 13:46, 17 September 2015
Short description: | p2@XXYLT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XXYLT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_NM_152531, uc003fum.3_5end |
EntrezGene: | XXYLT1 |
HGNC: | 26639 |
UniProt: | Q8NBI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.89e-20 | 121 |
embryonic cell | 1.22e-16 | 250 |
endothelial cell | 4.17e-16 | 36 |
endothelial cell of vascular tree | 1.95e-15 | 24 |
lining cell | 5.05e-14 | 58 |
barrier cell | 5.05e-14 | 58 |
meso-epithelial cell | 2.53e-13 | 45 |
blood vessel endothelial cell | 9.07e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.07e-12 | 18 |
electrically responsive cell | 3.86e-09 | 61 |
electrically active cell | 3.86e-09 | 61 |
fibroblast | 2.20e-08 | 76 |
muscle precursor cell | 3.78e-08 | 58 |
myoblast | 3.78e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.78e-08 | 58 |
muscle cell | 1.79e-07 | 55 |
endothelial cell of artery | 4.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature | 6.63e-20 | 78 |
vascular system | 6.63e-20 | 78 |
vessel | 5.03e-17 | 68 |
cardiovascular system | 2.10e-16 | 109 |
splanchnic layer of lateral plate mesoderm | 6.89e-16 | 83 |
circulatory system | 1.30e-15 | 112 |
epithelial tube | 2.44e-14 | 117 |
epithelial tube open at both ends | 6.57e-14 | 59 |
blood vessel | 6.57e-14 | 59 |
blood vasculature | 6.57e-14 | 59 |
vascular cord | 6.57e-14 | 59 |
blood vessel endothelium | 9.07e-12 | 18 |
endothelium | 9.07e-12 | 18 |
cardiovascular system endothelium | 9.07e-12 | 18 |
artery | 1.72e-11 | 42 |
arterial blood vessel | 1.72e-11 | 42 |
arterial system | 1.72e-11 | 42 |
simple squamous epithelium | 1.33e-09 | 22 |
squamous epithelium | 1.35e-09 | 25 |
unilaminar epithelium | 2.63e-09 | 148 |
epithelial vesicle | 1.22e-08 | 78 |
systemic artery | 4.01e-08 | 33 |
systemic arterial system | 4.01e-08 | 33 |
skeletal muscle tissue | 3.76e-07 | 62 |
striated muscle tissue | 3.76e-07 | 62 |
myotome | 3.76e-07 | 62 |
endothelial tube | 4.00e-07 | 9 |
arterial system endothelium | 4.00e-07 | 9 |
endothelium of artery | 4.00e-07 | 9 |