FFCP PHASE1:Hg19::chr3:77089138..77089149,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:77089138..77089149,+
|short_description=p16@ROBO2
|description=CAGE_peak_16_at_ROBO2_5end
|association_with_transcript=101bp_to_ENST00000461745_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCK4 | |UniProt=Q9HCK4 | ||
|association_with_transcript=101bp_to_ENST00000461745_5end | |||
|cluster_id=chr3:77089138..77089149,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_16_at_ROBO2_5end | |||
|id=chr3:77089138..77089149,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.26e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!4.98e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:8552;1.78e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.04e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.36e-22!94;UBERON:0001016!2.36e-22!94;UBERON:0001049!1.33e-21!57;UBERON:0005068!1.33e-21!57;UBERON:0006241!1.33e-21!57;UBERON:0007135!1.33e-21!57;UBERON:0002346!1.70e-21!90;UBERON:0005743!6.15e-21!86;UBERON:0001017!7.10e-21!82;UBERON:0002780!7.11e-19!41;UBERON:0001890!7.11e-19!41;UBERON:0006240!7.11e-19!41;UBERON:0002616!8.38e-19!59;UBERON:0003080!2.68e-18!42;UBERON:0000955!1.53e-17!69;UBERON:0006238!1.53e-17!69;UBERON:0003075!9.66e-17!86;UBERON:0007284!9.66e-17!86;UBERON:0000956!1.75e-16!25;UBERON:0000203!1.75e-16!25;UBERON:0001893!1.89e-16!34;UBERON:0002619!2.12e-16!22;UBERON:0001950!9.34e-16!20;UBERON:0001869!1.00e-15!32;UBERON:0002791!3.99e-15!33;UBERON:0003056!7.04e-15!61;UBERON:0002020!1.46e-14!34;UBERON:0003528!1.46e-14!34;UBERON:0000924!1.59e-14!173;UBERON:0006601!1.59e-14!173;UBERON:0001872!6.37e-12!5;UBERON:0004121!2.14e-11!169;UBERON:0000033!8.47e-11!123;UBERON:0000153!1.03e-10!129;UBERON:0007811!1.03e-10!129;UBERON:0007023!4.17e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.24e-32;2!UBERON:0002757;4.24e-32;2!UBERON:0010134;4.24e-32;2!UBERON:0005408;4.24e-32;2!UBERON:0001899;4.24e-32;2!UBERON:0003296;1.36e-16;4!UBERON:0010133;1.36e-16;4!UBERON:0002784;1.36e-16;4!UBERON:0001894;6.84e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.59e-32,2;UBERON:0002757,4.59e-32,2;UBERON:0010134,4.59e-32,2;UBERON:0005408,4.59e-32,2;UBERON:0001899,4.59e-32,2;UBERON:0003296,1.42e-16,4;UBERON:0010133,1.42e-16,4;UBERON:0002784,1.42e-16,4;UBERON:0001894,7.00e-10,7;UBERON:0006222,7.00e-10,7 | |||
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| ||
|short_description=p16@ROBO2 | |||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p16@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ROBO2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 101bp_to_ENST00000461745_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | Q9HCK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.26e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.59e-32 | 2 |
regional part of epithalamus | 4.59e-32 | 2 |
secretory circumventricular organ | 4.59e-32 | 2 |
circumventricular organ | 4.59e-32 | 2 |
epithalamus | 4.59e-32 | 2 |
gland of diencephalon | 1.42e-16 | 4 |
neuroendocrine gland | 1.42e-16 | 4 |
regional part of diencephalon | 1.42e-16 | 4 |
diencephalon | 7.00e-10 | 7 |
future diencephalon | 7.00e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.04e-16 | 1 |