FFCP PHASE1:Hg19::chr4:146191584..146191586,+: Difference between revisions
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|id=chr4:146191584..146191586,+
|short_description=p@chr4:146191584..146191586,+
|description=CAGE_peak_at_chr4:146191584..146191586,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:146191584..146191586,+ | |||
|coexpression_cluster_id=C984 | |||
|description=CAGE_peak_at_chr4:146191584..146191586,+ | |||
|id=chr4:146191584..146191586,+ | |||
|ontology_enrichment_celltype=CL:0000197!1.88e-21!6;CL:0000098!1.88e-21!6;CL:0002167!1.88e-21!6;CL:0002541!5.72e-12!3;CL:0002166!3.01e-11!3;CL:0002077!3.88e-08!33;CL:0002537!1.88e-07!5;CL:0000075!2.59e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.61e-30;3!CL:0000349;5.01e-11;19!CL:0002580;8.96e-09;3!CL:0000134;3.19e-08;55!CL:0000723;7.01e-08;61!CL:0000306;6.87e-07;4!CL:0002222;6.87e-07;4!CL:1000306;6.87e-07;4!CL:0002547;6.87e-07;4!CL:0002224;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.61e-30,3;CL:0000349,5.01e-11,19;CL:0002580,8.96e-09,3;CL:0000306,6.50e-07,4;CL:0002222,6.50e-07,4;CL:0002224,6.50e-07,4;CL:1000306,7.27e-07,4;CL:0002547,7.27e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.48e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.72e-12!3;UBERON:0000920!5.72e-12!3;UBERON:0005631!1.42e-09!14;UBERON:0000158!1.42e-09!14;UBERON:0001708!1.17e-08!4;UBERON:0001704!1.17e-08!4;UBERON:0002118!2.59e-07!5;UBERON:0004532!2.59e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.61e-30;3!UBERON:0000920;5.61e-30;3!UBERON:0005631;2.66e-20;10!UBERON:0000158;2.66e-20;10!UBERON:0000478;7.32e-09;24!UBERON:0010077;6.87e-07;4!UBERON:0005389;6.87e-07;4!UBERON:0000484;6.87e-07;4!UBERON:0004797;6.87e-07;4!UBERON:0000415;6.87e-07;4!UBERON:0007240;6.87e-07;4!UBERON:0005742;6.87e-07;4!UBERON:0005734;6.87e-07;4!UBERON:0000965;6.87e-07;4!UBERON:0001803;6.87e-07;4!UBERON:0004664;6.87e-07;4!UBERON:0004663;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.61e-30,3;UBERON:0005631,1.02e-14,14;UBERON:0000158,1.02e-14,14;UBERON:0003124,1.80e-13,7;UBERON:0000478,7.32e-09,24;UBERON:0010077,6.50e-07,4;UBERON:0005389,6.50e-07,4;UBERON:0000484,6.50e-07,4;UBERON:0002546,6.50e-07,4;UBERON:0000965,6.50e-07,4;UBERON:0001803,6.50e-07,4;UBERON:0003073,6.50e-07,4;UBERON:0005426,6.50e-07,4;UBERON:0000415,7.27e-07,4;UBERON:0007240,7.27e-07,4;UBERON:0005742,7.27e-07,4;UBERON:0005734,7.27e-07,4;UBERON:0004664,7.27e-07,4;UBERON:0004663,7.27e-07,4 | |||
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|short_description=p@chr4:146191584..146191586,+ | |||
}} | }} |
Latest revision as of 02:02, 30 July 2015
Short description: | p@chr4:146191584..146191586, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:146191584..146191586, + |
Coexpression cluster: | C984_chorionic_Preadipocyte_Fibroblast_mesenchymal_Lens_amniotic_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.61e-30 | 3 |
extraembryonic cell | 5.01e-11 | 19 |
preadipocyte of the breast | 8.96e-09 | 3 |
crystallin accumulating cell | 6.50e-07 | 4 |
vertebrate lens cell | 6.50e-07 | 4 |
lens epithelial cell | 6.50e-07 | 4 |
fibroblast of tunica adventitia of artery | 7.27e-07 | 4 |
fibroblast of the aortic adventitia | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.61e-30 | 3 |
extraembryonic membrane | 1.02e-14 | 14 |
membranous layer | 1.02e-14 | 14 |
chorion | 1.80e-13 | 7 |
extraembryonic structure | 7.32e-09 | 24 |
cuboidal epithelium | 6.50e-07 | 4 |
transparent eye structure | 6.50e-07 | 4 |
simple cuboidal epithelium | 6.50e-07 | 4 |
cranial placode | 6.50e-07 | 4 |
lens of camera-type eye | 6.50e-07 | 4 |
epithelium of lens | 6.50e-07 | 4 |
lens placode | 6.50e-07 | 4 |
lens vesicle | 6.50e-07 | 4 |
artery wall | 7.27e-07 | 4 |
tunica adventitia of artery | 7.27e-07 | 4 |
adventitia | 7.27e-07 | 4 |
tunica adventitia of blood vessel | 7.27e-07 | 4 |
aorta tunica adventitia | 7.27e-07 | 4 |
aorta wall | 7.27e-07 | 4 |