FFCP PHASE1:Hg19::chr4:176734130..176734137,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:176734130..176734137,-
|short_description=p33@GPM6A
|description=CAGE_peak_33_at_GPM6A_5end
|association_with_transcript=44bp_to_NM_201591,uc003iuf.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=P51674,Q86YB0 | |UniProt=P51674,Q86YB0 | ||
|association_with_transcript=44bp_to_NM_201591,uc003iuf.2_5end | |||
|cluster_id=chr4:176734130..176734137,- | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_33_at_GPM6A_5end | |||
|id=chr4:176734130..176734137,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.74e-14;25!CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.96e-14,25;CL:0000243,2.04e-10,15;CL:0000125,2.04e-10,15;CL:0000030,2.04e-10,15;CL:0000339,2.04e-10,15;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0000540,7.25e-08,6;CL:0000031,7.25e-08,6;CL:0000404,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.62e-15;10!CL:0000339;2.04e-10;15!CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.57e-14;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.57e-14,11 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001874;2.21e-40;1!UBERON:0002771;5.69e-21;2!UBERON:0005383;1.83e-14;3!UBERON:0005382;1.83e-14;3!UBERON:0000369;3.42e-11;4!UBERON:0002435;3.42e-11;4!UBERON:0000204;3.42e-11;4!UBERON:0000200;6.78e-08;6!UBERON:0001871;6.04e-07;6!UBERON:0009663;6.04e-07;7!UBERON:0000955;6.71e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,1.48e-40,1;UBERON:0002771,5.70e-21,2;UBERON:0005383,1.60e-14,3;UBERON:0005382,1.60e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000369,3.10e-11,4;UBERON:0002435,3.10e-11,4;UBERON:0000204,3.10e-11,4;UBERON:0010082,3.10e-11,4;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0000200,6.78e-08,6;UBERON:0009663,5.70e-07,7;UBERON:0001871,6.04e-07,6 | |||
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|short_description=p33@GPM6A | |||
}} | }} |
Latest revision as of 21:58, 16 September 2015
Short description: | p33@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_GPM6A_5end |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | 44bp_to_NM_201591, uc003iuf.2_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674Q86YB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.96e-14 | 25 |
glial cell (sensu Vertebrata) | 2.04e-10 | 15 |
glial cell | 2.04e-10 | 15 |
glioblast | 2.04e-10 | 15 |
glioblast (sensu Vertebrata) | 2.04e-10 | 15 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
neuron | 7.25e-08 | 6 |
neuroblast | 7.25e-08 | 6 |
electrically signaling cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
putamen | 1.48e-40 | 1 |
middle temporal gyrus | 5.70e-21 | 2 |
caudate-putamen | 1.60e-14 | 3 |
dorsal striatum | 1.60e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
corpus striatum | 3.10e-11 | 4 |
striatum | 3.10e-11 | 4 |
ventral part of telencephalon | 3.10e-11 | 4 |
future corpus striatum | 3.10e-11 | 4 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
gyrus | 6.78e-08 | 6 |
telencephalic nucleus | 5.70e-07 | 7 |
temporal lobe | 6.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.57e-14 | 11 |