FFCP PHASE1:Hg19::chr4:73434921..73434961,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:73434921..73434961,-
|short_description=p1@ADAMTS3
|description=CAGE_peak_1_at_ADAMTS3_5end
|association_with_transcript=-405bp_to_ENST00000286657,NM_01424...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9508 | |EntrezGene=9508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=219 | |HGNC=219 | ||
|TSSclassifier=strong | |||
|UniProt=O15072,B7Z2U9,Q96AY5 | |UniProt=O15072,B7Z2U9,Q96AY5 | ||
|association_with_transcript=-405bp_to_ENST00000286657,NM_014243,uc003hgk.1_5end | |||
|cluster_id=chr4:73434921..73434961,- | |||
|description=CAGE_peak_1_at_ADAMTS3_5end | |||
|id=chr4:73434921..73434961,- | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-10!180;CL:0000393!2.05e-08!60;CL:0000211!2.05e-08!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.75e-07,61;CL:0000211,5.75e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.87e-12!94;UBERON:0001016!6.87e-12!94;UBERON:0005743!2.38e-11!86;UBERON:0004121!9.30e-11!169;UBERON:0000481!1.98e-10!347;UBERON:0001017!2.34e-10!82;UBERON:0000119!9.77e-10!312;UBERON:0000924!1.30e-09!173;UBERON:0006601!1.30e-09!173;UBERON:0000483!1.46e-09!309;UBERON:0000033!7.13e-09!123;UBERON:0000153!9.49e-09!129;UBERON:0007811!9.49e-09!129;UBERON:0003056!1.58e-08!61;UBERON:0003075!3.19e-08!86;UBERON:0007284!3.19e-08!86;UBERON:0000475!7.46e-08!365;UBERON:0000914!3.75e-07!83;UBERON:0002329!3.75e-07!83;UBERON:0003077!3.75e-07!83;UBERON:0003059!3.75e-07!83;UBERON:0007282!3.75e-07!83;UBERON:0009618!3.75e-07!83;UBERON:0007285!3.75e-07!83;UBERON:0002616!4.89e-07!59;UBERON:0000955!5.65e-07!69;UBERON:0006238!5.65e-07!69;UBERON:0002346!7.00e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;6.05e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.63e-10,132;UBERON:0001016,7.69e-09,89;UBERON:0001017,8.51e-09,81;UBERON:0004121,2.26e-08,171;UBERON:0000924,2.26e-08,171;UBERON:0006601,2.26e-08,171;UBERON:0003056,3.34e-07,61;UBERON:0003075,3.62e-07,82;UBERON:0007284,3.62e-07,82;UBERON:0006876,6.15e-07,11 | |||
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|short_description=p1@ADAMTS3 | |||
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Latest revision as of 12:14, 18 September 2015
Short description: | p1@ADAMTS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -405bp_to_ENST00000286657, NM_014243, uc003hgk.1_5end |
EntrezGene: | ADAMTS3 |
HGNC: | 219 |
UniProt: | O15072B7Z2U9Q96AY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.75e-07 | 61 |
electrically active cell | 5.75e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.63e-10 | 132 |
nervous system | 7.69e-09 | 89 |
central nervous system | 8.51e-09 | 81 |
ectoderm-derived structure | 2.26e-08 | 171 |
ectoderm | 2.26e-08 | 171 |
presumptive ectoderm | 2.26e-08 | 171 |
pre-chordal neural plate | 3.34e-07 | 61 |
neural plate | 3.62e-07 | 82 |
presumptive neural plate | 3.62e-07 | 82 |
vasculature of organ | 6.15e-07 | 11 |