FFCP PHASE1:Hg19::chr5:153570285..153570308,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:153570285..153570308,+
|short_description=p1@GALNT10
|description=CAGE_peak_1_at_GALNT10_5end
|association_with_transcript=0bp_to_ENST00000297107,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55568 | |EntrezGene=55568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19873 | |HGNC=19873 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SR1,F2Z2M7 | |UniProt=Q86SR1,F2Z2M7 | ||
|association_with_transcript=0bp_to_ENST00000297107,ENST00000425427,ENST00000520647,ENST00000521786,NM_198321,uc003lvg.1,uc003lvh.2,uc010jic.2_5end | |||
|cluster_id=chr5:153570285..153570308,+ | |||
|description=CAGE_peak_1_at_GALNT10_5end | |||
|id=chr5:153570285..153570308,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.09e-16!180;CL:0000222!5.10e-12!119;CL:0002371!6.72e-10!591;CL:0000057!2.42e-09!75;CL:0000359!7.49e-09!32;CL:0000144!1.04e-08!625;CL:0000680!2.71e-08!57;CL:0000056!2.71e-08!57;CL:0000355!2.71e-08!57;CL:0000192!8.22e-08!42;CL:0000514!8.22e-08!42;CL:0000187!1.12e-07!54;CL:0000048!3.79e-07!430;CL:0000183!4.79e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.21e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.02e-12,121;CL:0000057,8.52e-10,76;CL:0000359,7.49e-09,32;CL:0000680,3.06e-08,58;CL:0000056,3.06e-08,58;CL:0000355,3.06e-08,58;CL:0000192,9.80e-08,43;CL:0000514,9.80e-08,43;CL:0000048,1.10e-07,427;CL:0000187,1.25e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.49e-14!110;UBERON:0001009!2.82e-13!113;UBERON:0002049!3.30e-12!79;UBERON:0007798!3.30e-12!79;UBERON:0004872!4.82e-11!84;UBERON:0001637!8.92e-10!42;UBERON:0003509!8.92e-10!42;UBERON:0004572!8.92e-10!42;UBERON:0003914!1.11e-09!118;UBERON:0001981!2.25e-09!60;UBERON:0007500!2.25e-09!60;UBERON:0004537!2.25e-09!60;UBERON:0006965!2.25e-09!60;UBERON:0000055!2.33e-09!69;UBERON:0004573!3.73e-08!33;UBERON:0004571!3.73e-08!33;UBERON:0000490!4.61e-07!138;UBERON:0002385!6.21e-07!63;UBERON:0001015!6.21e-07!63;UBERON:0000383!6.21e-07!63;UBERON:0001134!9.86e-07!61;UBERON:0002036!9.86e-07!61;UBERON:0003082!9.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.95e-08;42!UBERON:0003509;8.95e-08;42!UBERON:0004572;8.95e-08;42!UBERON:0004573;1.85e-07;33!UBERON:0004571;1.85e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.05e-13,109;UBERON:0001009,8.15e-13,112;UBERON:0002049,1.03e-11,78;UBERON:0007798,1.03e-11,78;UBERON:0004872,1.40e-10,83;UBERON:0001637,8.92e-10,42;UBERON:0003509,8.92e-10,42;UBERON:0004572,8.92e-10,42;UBERON:0003914,1.07e-09,117;UBERON:0000055,6.68e-09,68;UBERON:0007500,6.76e-09,59;UBERON:0001981,6.76e-09,59;UBERON:0004537,6.76e-09,59;UBERON:0006965,6.76e-09,59;UBERON:0004573,3.73e-08,33;UBERON:0004571,3.73e-08,33;UBERON:0002385,6.66e-07,64;UBERON:0001015,6.66e-07,64;UBERON:0000383,6.66e-07,64 | |||
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| ||
|short_description=p1@GALNT10 | |||
}} | }} |
Latest revision as of 11:45, 16 September 2015
Short description: | p1@GALNT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GALNT10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000297107, ENST00000425427, ENST00000520647, ENST00000521786, NM_198321, uc003lvg.1, uc003lvh.2, uc010jic.2_5end |
EntrezGene: | GALNT10 |
HGNC: | 19873 |
UniProt: | Q86SR1F2Z2M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.02e-12 | 121 |
fibroblast | 8.52e-10 | 76 |
vascular associated smooth muscle cell | 7.49e-09 | 32 |
muscle precursor cell | 3.06e-08 | 58 |
myoblast | 3.06e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.06e-08 | 58 |
smooth muscle cell | 9.80e-08 | 43 |
smooth muscle myoblast | 9.80e-08 | 43 |
multi fate stem cell | 1.10e-07 | 427 |
muscle cell | 1.25e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.05e-13 | 109 |
circulatory system | 8.15e-13 | 112 |
vasculature | 1.03e-11 | 78 |
vascular system | 1.03e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 1.40e-10 | 83 |
artery | 8.92e-10 | 42 |
arterial blood vessel | 8.92e-10 | 42 |
arterial system | 8.92e-10 | 42 |
epithelial tube | 1.07e-09 | 117 |
vessel | 6.68e-09 | 68 |
epithelial tube open at both ends | 6.76e-09 | 59 |
blood vessel | 6.76e-09 | 59 |
blood vasculature | 6.76e-09 | 59 |
vascular cord | 6.76e-09 | 59 |
systemic artery | 3.73e-08 | 33 |
systemic arterial system | 3.73e-08 | 33 |
muscle tissue | 6.66e-07 | 64 |
musculature | 6.66e-07 | 64 |
musculature of body | 6.66e-07 | 64 |