FFCP PHASE1:Hg19::chr7:127258139..127258173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:127258139..127258173,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description= | |description=CAGE_peak_1_at_PAX4_5end | ||
|id=chr7:127258139..127258173,- | |id=chr7:127258139..127258173,- | ||
|ontology_enrichment_celltype=CL:0002553!7.55e-14!1;CL:0002535!9.25e-08!2 | |ontology_enrichment_celltype=CL:0002553!7.55e-14!1;CL:0002535!9.25e-08!2 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.48e-18,2;UBERON:0004801,5.48e-18,2;UBERON:0002114,3.24e-12,2;UBERON:0001052,1.57e-09,4;UBERON:0000160,2.80e-08,17;UBERON:0004907,7.01e-08,5;UBERON:0002108,7.49e-08,4;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6 | |ontology_enrichment_uberon_v019_2=UBERON:0006955,5.48e-18,2;UBERON:0004801,5.48e-18,2;UBERON:0002114,3.24e-12,2;UBERON:0001052,1.57e-09,4;UBERON:0000160,2.80e-08,17;UBERON:0004907,7.01e-08,5;UBERON:0002108,7.49e-08,4;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6 | ||
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|short_description= | |short_description=p1@PAX4 | ||
}} | }} |
Latest revision as of 02:28, 16 September 2015
Short description: | p1@PAX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAX4_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | PAX4 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.48e-18 | 2 |
cervix epithelium | 5.48e-18 | 2 |
duodenum | 3.24e-12 | 2 |
rectum | 1.57e-09 | 4 |
intestine | 2.80e-08 | 17 |
lower digestive tract | 7.01e-08 | 5 |
small intestine | 7.49e-08 | 4 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.81e-10 | 14 |
cervical cancer | 5.35e-08 | 5 |