FFCP PHASE1:Hg19::chr5:68665815..68665826,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:68665815..68665826,-
|short_description=p9@TAF9
|description=CAGE_peak_9_at_TAF9_5end
|association_with_transcript=13bp_to_ENST00000328663,ENST00000380818,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6880 | |EntrezGene=6880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11542 | |HGNC=11542 | ||
|TSSclassifier=strong | |||
|UniProt=Q16594,Q9Y3D8 | |UniProt=Q16594,Q9Y3D8 | ||
|association_with_transcript=13bp_to_ENST00000328663,ENST00000380818,NM_001015891,NM_001015892,uc003jwb.2,uc003jwf.1_5end | |||
|cluster_id=chr5:68665815..68665826,- | |||
|description=CAGE_peak_9_at_TAF9_5end | |||
|id=chr5:68665815..68665826,- | |||
|ontology_enrichment_celltype=CL:0000860!3.35e-08!45;CL:0002057!3.57e-08!42;CL:0000839!1.99e-07!70;CL:0002194!2.44e-07!63;CL:0000576!2.44e-07!63;CL:0000040!2.44e-07!63;CL:0000559!2.44e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.20e-15;2!CL:0000558;3.20e-15;2!CL:0002581;1.83e-08;1!CL:0002591;1.83e-08;1!CL:0000306;4.70e-08;4!CL:0002222;4.70e-08;4!CL:0002224;4.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.32e-15,2;CL:0000765,5.32e-15,2;CL:0000050,5.32e-15,2;CL:0000038,5.32e-15,2;CL:0000558,5.32e-15,2;CL:0000547,5.32e-15,2;CL:0000549,5.32e-15,2;CL:0000550,5.32e-15,2;CL:0000552,5.32e-15,2;CL:0002581,1.10e-08,1;CL:0002591,3.28e-08,1;CL:0000306,4.38e-08,4;CL:0002222,4.38e-08,4;CL:0002224,4.38e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.73e-09;1!DOID:4549;6.73e-09;1!DOID:5861;6.73e-09;1!DOID:6496;6.73e-09;1!DOID:6193;6.73e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.03e-09,1;DOID:3371,6.50e-09,1;DOID:4549,6.50e-09,1;DOID:5861,6.50e-09,1;DOID:6496,6.50e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;4.70e-08;4!UBERON:0005389;4.70e-08;4!UBERON:0000484;4.70e-08;4!UBERON:0000965;4.70e-08;4!UBERON:0001803;4.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,4.38e-08,4;UBERON:0005389,4.38e-08,4;UBERON:0000484,4.38e-08,4;UBERON:0002546,4.38e-08,4;UBERON:0000965,4.38e-08,4;UBERON:0001803,4.38e-08,4;UBERON:0003073,4.38e-08,4;UBERON:0005426,4.38e-08,4 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0.152826811495903,0.164201178899891,0.236132343941038,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.485168122375632,2.09186133215116,0.411167888021826,0.929119112685311,0.863077176966451,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0.306083892370903,0.962787081228281,0,0,0.598390972864896,0.426224750532694,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.868755378820466,0.605399502633369,0.736555271975129,0.949387162322653,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0.983548850569165,0.393010762749165,0,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.443067789167242,0,0,0.260118695119756,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.0654895377488563,0,0.370784442784429,0.649094787309367,0,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0.775250277507987,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0,0.709336764396714,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.624320153660641,0.570471821544449,0.298897361103602,0,0.161872944368132,0.421352420106746,0,0.368502951935304,0.206651562351531,0,0,0.910161361938026,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0.453728732640084,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.675105328965065,0.292311015483596,0,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0.386521706326594,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0.949082476444386,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.658501712451753,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0.469634776943287,0,0,0.380508304469197,0.790204397959275,0,0,0.234004265139238,0,1.87467667973554,0,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0.43596006883328,0.51336800074665,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,1.20575750823834,0,0.199945982364114,1.2162378064119,0,2.10833939483032,0.479249710983165,0,0,0,0.61642896765115,0.537182889719687,0,0.591092280605782,0.215627574859517,0.256686072559497,1.01637849688985,0,0,0,0,0.749007023947182,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,1.32845119707087,0.368738337083406,0.695068915744663,0.195801157462741,0,0,0,0,1.21251028578504,0,0,0.496215615637554,0,0.280660094433074,0.640695746278505,0,0,1.48418066444991,0.616838775210622,0.532685175939381,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,0.368323955743585,0.229628896329213,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,1.09629938322967,1.3071772551245,0.512900250232778,0,0.325378394664303,0,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.661139661443912,0,0,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0.471249609382746,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0.491245205065606,0,0.354761064070598,0,0,0,0.349934720244983,0.192444225451024,0,0,0,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.213648142254946,0,0.490080431962063,0,0,0.497992903438899,0.478278818186467,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0.228234679033192,0.313359791546046,0,0.338583555603207,0.481764225311099,0.201799707191048,0,0.343505344755765,0.307240764308458,0.447352215784832,1.00109485027145,0.390776190804081,0,0,0,0.99921590399346,1.4098700508785,0.18714054040822,0.293016358543788,0,0.111443384277478,1.13654458722565,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0.50386549570855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| ||
|short_description=p9@TAF9 | |||
}} | }} |
Latest revision as of 13:07, 18 September 2015
Short description: | p9@TAF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TAF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000328663, ENST00000380818, NM_001015891, NM_001015892, uc003jwb.2, uc003jwf.1_5end |
EntrezGene: | TAF9 |
HGNC: | 11542 |
UniProt: | Q16594Q9Y3D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.32e-15 | 2 |
erythroblast | 5.32e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 5.32e-15 | 2 |
erythroid progenitor cell | 5.32e-15 | 2 |
reticulocyte | 5.32e-15 | 2 |
proerythroblast | 5.32e-15 | 2 |
basophilic erythroblast | 5.32e-15 | 2 |
polychromatophilic erythroblast | 5.32e-15 | 2 |
orthochromatic erythroblast | 5.32e-15 | 2 |
perirenal preadipocyte | 1.10e-08 | 1 |
smooth muscle cell of the pulmonary artery | 3.28e-08 | 1 |
crystallin accumulating cell | 4.38e-08 | 4 |
vertebrate lens cell | 4.38e-08 | 4 |
lens epithelial cell | 4.38e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 4.38e-08 | 4 |
transparent eye structure | 4.38e-08 | 4 |
simple cuboidal epithelium | 4.38e-08 | 4 |
cranial placode | 4.38e-08 | 4 |
lens of camera-type eye | 4.38e-08 | 4 |
epithelium of lens | 4.38e-08 | 4 |
lens placode | 4.38e-08 | 4 |
lens vesicle | 4.38e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.03e-09 | 1 |
chondrosarcoma | 6.50e-09 | 1 |
extraosseous chondrosarcoma | 6.50e-09 | 1 |
myxoid chondrosarcoma | 6.50e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.50e-09 | 1 |