FFCP PHASE1:Hg19::chr5:93698011..93698039,-: Difference between revisions
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|id=chr5:93698011..93698039,-
|short_description=p@chr5:93698011..93698039,-
|description=CAGE_peak_at_chr5:93698011..93698039,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:93698011..93698039,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr5:93698011..93698039,- | |||
|id=chr5:93698011..93698039,- | |||
|ontology_enrichment_celltype=CL:0002322!1.24e-66!5;CL:0000540!6.81e-21!6;CL:0000031!6.81e-21!6;CL:0000404!6.81e-21!6;CL:0000039!1.84e-17!7;CL:0000586!1.84e-17!7;CL:0000047!7.74e-16!8;CL:0000148!1.33e-12!10;CL:0000541!1.33e-12!10;CL:0000147!3.64e-09!14;CL:1000415!8.60e-08!2;CL:0000133!1.30e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.63e-82;5!CL:0002321;1.02e-27;15!CL:0000540;9.67e-26;6!CL:0000404;9.67e-26;6!CL:0000039;1.77e-21;7!CL:0000586;1.77e-21;7!CL:0000148;1.70e-15;10!CL:0000147;2.97e-11;14!CL:0000710;4.74e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.77e-82,5;CL:0000540,1.01e-25,6;CL:0000031,1.01e-25,6;CL:0000404,1.01e-25,6;CL:0000039,1.77e-21,7;CL:0000586,1.77e-21,7;CL:0000047,1.76e-19,8;CL:0000148,1.74e-15,10;CL:0000541,1.74e-15,10;CL:0000147,3.02e-11,14;CL:0000133,1.24e-09,59;CL:0000710,4.80e-08,20;CL:0000221,6.76e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.67e-26;6!UBERON:0009117;2.99e-15;10!UBERON:0005564;2.99e-15;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.94e-07;22!DOID:2994;2.94e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.94e-07,22;DOID:2994,2.94e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.31e-15!8;UBERON:0003135!2.43e-11!11;UBERON:0000007!8.04e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.92e-19;8!UBERON:0003135;6.32e-14;11!UBERON:0000922;3.45e-13;49!UBERON:0000991;1.41e-07;21!UBERON:0003101;2.94e-07;22!UBERON:0000079;2.94e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.92e-19,8;UBERON:0003135,6.32e-14,11;UBERON:0000991,1.41e-07,21;UBERON:0009196,1.41e-07,21;UBERON:0009117,1.41e-07,21;UBERON:0005564,1.41e-07,21;UBERON:0004176,2.94e-07,22;UBERON:0003101,2.94e-07,22;UBERON:0000079,2.94e-07,22 | |||
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|short_description=p@chr5:93698011..93698039,- | |||
}} | }} |
Latest revision as of 17:21, 30 July 2015
Short description: | p@chr5:93698011..93698039, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:93698011..93698039, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.77e-82 | 5 |
neuron | 1.01e-25 | 6 |
neuroblast | 1.01e-25 | 6 |
electrically signaling cell | 1.01e-25 | 6 |
germ line cell | 1.77e-21 | 7 |
germ cell | 1.77e-21 | 7 |
neuronal stem cell | 1.76e-19 | 8 |
melanocyte | 1.74e-15 | 10 |
melanoblast | 1.74e-15 | 10 |
pigment cell | 3.02e-11 | 14 |
neurectodermal cell | 1.24e-09 | 59 |
neurecto-epithelial cell | 4.80e-08 | 20 |
ectodermal cell | 6.76e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.92e-19 | 8 |
male reproductive organ | 6.32e-14 | 11 |
gonad | 1.41e-07 | 21 |
indifferent external genitalia | 1.41e-07 | 21 |
indifferent gonad | 1.41e-07 | 21 |
gonad primordium | 1.41e-07 | 21 |
external genitalia | 2.94e-07 | 22 |
male organism | 2.94e-07 | 22 |
male reproductive system | 2.94e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.94e-07 | 22 |
germ cell cancer | 2.94e-07 | 22 |