FFCP PHASE1:Hg19::chr6:138820612..138820623,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:138820612..138820623,-
|short_description=p10@NHSL1
|description=CAGE_peak_10_at_NHSL1_5end
|association_with_transcript=7bp_to_ENST00000343505,ENST0000042...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt=E2QRJ1 | |UniProt=E2QRJ1 | ||
|association_with_transcript=7bp_to_ENST00000343505,ENST00000426841_5end | |||
|cluster_id=chr6:138820612..138820623,- | |||
|coexpression_cluster_id=C4564 | |||
|description=CAGE_peak_10_at_NHSL1_5end | |||
|id=chr6:138820612..138820623,- | |||
|ontology_enrichment_celltype=CL:0000128!7.38e-07!7;CL:0000126!7.38e-07!7;CL:0000127!7.38e-07!7;CL:0002453!7.38e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.38e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.65e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.48e-10;11!UBERON:0009497;6.85e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.51e-07!55;UBERON:0005173!4.51e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.53e-12;17!UBERON:0005409;5.18e-12;22!UBERON:0002107;1.62e-11;19!UBERON:0006925;1.62e-11;19!UBERON:0001905;2.84e-11;2!UBERON:0002757;2.84e-11;2!UBERON:0010134;2.84e-11;2!UBERON:0005408;2.84e-11;2!UBERON:0001899;2.84e-11;2!UBERON:0002423;5.66e-11;25!UBERON:0002108;1.73e-09;4!UBERON:0002368;5.04e-09;33!UBERON:0000949;1.18e-07;43!UBERON:0004921;9.33e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.27e-12,17;UBERON:0002107,1.28e-11,19;UBERON:0006925,1.28e-11,19;UBERON:0008836,1.28e-11,19;UBERON:0001905,2.84e-11,2;UBERON:0002757,2.84e-11,2;UBERON:0010134,2.84e-11,2;UBERON:0005408,2.84e-11,2;UBERON:0001899,2.84e-11,2;UBERON:0009497,4.65e-11,25;UBERON:0000015,4.65e-11,25;UBERON:0002423,4.65e-11,25;UBERON:0006235,4.65e-11,25;UBERON:0004161,4.65e-11,25;UBERON:0005409,1.86e-10,25;UBERON:0005172,4.47e-10,54;UBERON:0005173,4.47e-10,54;UBERON:0008835,6.66e-10,22;UBERON:0003894,6.66e-10,22;UBERON:0002368,9.08e-10,35;UBERON:0002108,1.89e-09,4;UBERON:0009854,1.98e-09,23;UBERON:0002417,7.88e-09,60;UBERON:0000916,7.88e-09,60;UBERON:0007499,1.34e-08,25;UBERON:0009856,3.13e-08,26;UBERON:0004921,1.11e-07,118;UBERON:0000949,3.02e-07,45;UBERON:0002365,9.49e-07,31;UBERON:0002330,9.49e-07,31 | |||
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| ||
|short_description=p10@NHSL1 | |||
}} | }} |
Latest revision as of 05:04, 25 September 2015
Short description: | p10@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NHSL1_5end |
Coexpression cluster: | C4564_pineal_small_argyrophil_colon_cord_Hepatocyte_B |
Association with transcript: | 7bp_to_ENST00000343505, ENST00000426841_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E2QRJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.65e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.27e-12 | 17 |
liver | 1.28e-11 | 19 |
digestive gland | 1.28e-11 | 19 |
liver bud | 1.28e-11 | 19 |
pineal body | 2.84e-11 | 2 |
regional part of epithalamus | 2.84e-11 | 2 |
secretory circumventricular organ | 2.84e-11 | 2 |
circumventricular organ | 2.84e-11 | 2 |
epithalamus | 2.84e-11 | 2 |
epithelium of foregut-midgut junction | 4.65e-11 | 25 |
anatomical boundary | 4.65e-11 | 25 |
hepatobiliary system | 4.65e-11 | 25 |
foregut-midgut junction | 4.65e-11 | 25 |
septum transversum | 4.65e-11 | 25 |
gastrointestinal system | 1.86e-10 | 25 |
abdomen element | 4.47e-10 | 54 |
abdominal segment element | 4.47e-10 | 54 |
hepatic diverticulum | 6.66e-10 | 22 |
liver primordium | 6.66e-10 | 22 |
endocrine gland | 9.08e-10 | 35 |
small intestine | 1.89e-09 | 4 |
digestive tract diverticulum | 1.98e-09 | 23 |
abdominal segment of trunk | 7.88e-09 | 60 |
abdomen | 7.88e-09 | 60 |
epithelial sac | 1.34e-08 | 25 |
sac | 3.13e-08 | 26 |
subdivision of digestive tract | 1.11e-07 | 118 |
endocrine system | 3.02e-07 | 45 |
exocrine gland | 9.49e-07 | 31 |
exocrine system | 9.49e-07 | 31 |